RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 C1QTNF1Q9BXJ1 281 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 RHOBTB2Q9BYZ6 727 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 ZCWPW1Q9H0M4 648 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 NLRC4Q9NPP4 1024 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 KIAA1257Q9ULG3 409 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 MAFFQ9ULX9 164 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
LINC00408-201ENST00000447784 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 PRRG1O14668 218 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 PAEPP09466 180 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 OR4Q2P0C623 313 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 STAT1P42224 750 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 ZNF75DP51815 510 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 BPIFB4P59827 614 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 ROR1Q01973 937 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 GPR17Q13304 367 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 ORC1Q13415 861 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 TRIM14Q14142 442 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 MDH1BQ5I0G3 518 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 ATAT1Q5SQI0 421 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 RARS2Q5T160 578 aaKnown RBP12.32□□□□□ -0.44
LINC00408-201ENST00000447784 LIN9Q5TKA1 542 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 LILRA6Q6PI73 481 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 GPR149Q86SP6 731 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 DRC7Q8IY82 874 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 CRYBG2Q8N1P7 616 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
LINC00408-201ENST00000447784 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 C2orf15Q8WU43 125 aaKnown RBP12.32□□□□□ -0.44
LINC00408-201ENST00000447784 PGLYRP2Q96PD5 576 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 RTP3Q9BQQ7 232 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 APOL5Q9BWW9 433 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 GANQ9H2C0 597 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 CEP72Q9P209 647 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
LINC00408-201ENST00000447784 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
LINC00408-201ENST00000447784 BRWD1Q9NSI6 2320 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ADAM12O43184 909 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 MED7O43513 233 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 TGM5O43548 720 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 DCXO43602 365 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 HCRTO43612 131 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ATP2C2O75185 946 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 NOL4O94818 638 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 RAD23BP54727 409 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 SLC8A3P57103 927 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 PTK2Q05397 1052 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 SGO2Q562F6 1265 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 FIGNQ5HY92 759 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 RSPO2Q6UXX9 243 aaPredicted RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 CCDC149Q6ZUS6 474 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 C12orf76Q8N812 135 aaPredicted RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 CPLX3Q8WVH0 158 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 SHC3Q92529 594 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 MRFAP1L1Q96HT8 127 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 TMEM209Q96SK2 561 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ELOVL4Q9GZR5 314 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 EPHX3Q9H6B9 360 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 GRPEL1Q9HAV7 217 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 MAN1C1Q9NR34 630 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ABI2Q9NYB9 513 aaPredicted RBP12.31□□□□□ -0.44
LINC00408-201ENST00000447784 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
LINC00408-201ENST00000447784 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 F8VZ95 297 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 EPHB6O15197 1021 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 SPATA31D3P0C874 917 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 VDRP11473 427 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 ATF2P15336 505 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 SOX5P35711 763 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 PBX1P40424 430 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 TUFMP49411 452 aaKnown RBP12.3□□□□□ -0.44
LINC00408-201ENST00000447784 MRE11P49959 708 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 GSE1Q14687 1217 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 FAM171BQ6P995 826 aa12.3□□□□□ -0.44
LINC00408-201ENST00000447784 TMC5Q6UXY8 1006 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms