RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CLCN3P51790 818 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 ATXN3P54252 364 aaPredicted RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 USP39Q53GS9 565 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 HSP90AB4PQ58FF6 505 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 TWF2Q6IBS0 349 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 CEP85Q6P2H3 762 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 MRPL10Q7Z7H8 261 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 DGKHQ86XP1 1220 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 LNX1Q8TBB1 728 aaPredicted RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 SNRNP27Q8WVK2 155 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 KIF1BPQ96EK5 621 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 CHFRQ96EP1 664 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 TMEM209Q96SK2 561 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SEC62Q99442 399 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 ARID3AQ99856 593 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 GTPBP2Q9BX10 602 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 TMPRSS13Q9BYE2 586 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 RSAD1Q9HA92 442 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 VAT1LQ9HCJ6 419 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 LATS2Q9NRM7 1088 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 GTSE1Q9NYZ3 720 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 PCOLCE2Q9UKZ9 415 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 UBIAD1Q9Y5Z9 338 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 OAS3Q9Y6K5 1087 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 CNTNAP2Q9UHC6 1331 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 MYO16Q9Y6X6 1858 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 CACNA1DQ01668 2161 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 FAM149AA5PLN7 773 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 MAFGO15525 162 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 CSDE1O75534 798 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 AFPP02771 609 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 HLA-EP13747 358 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 PTPN2P17706 415 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 GFPT1Q06210 699 aaPredicted RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 EHHADHQ08426 723 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 MTMR1Q13613 665 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 RAB33AQ14088 237 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 GRM4Q14833 912 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SLC35G1Q2M3R5 365 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SPDYCQ5MJ68 293 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 FDX2Q6P4F2 183 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SPACA3Q8IXA5 215 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 TRMT2AQ8IZ69 625 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 METTL13Q8N6R0 699 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 OLIG1Q8TAK6 271 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 CEP76Q8TAP6 659 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SHKBP1Q8TBC3 707 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 SNX29Q8TEQ0 813 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 E2F7Q96AV8 911 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 NXPE2Q96DL1 559 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 PGBD4Q96DM1 585 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 FNBP1Q96RU3 617 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 LRRCC1Q9C099 1032 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 BHLHE41Q9C0J9 482 aaPredicted RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 MAN2B2Q9Y2E5 1009 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 HIF3AQ9Y2N7 669 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 PCDHB2Q9Y5E7 798 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 NFASCO94856 1347 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 ICE1Q9Y2F5 2266 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 OTOGQ6ZRI0 2925 aa3.67□□□□□ -1.82
PMS1-215ENST00000447232 TDRD15B5MCY1 1934 aaKnown RBP3.67□□□□□ -1.82
PMS1-215ENST00000447232 ARHGEF37A1IGU5 675 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 TRDMT1O14717 391 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 DHX16O60231 1041 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 CFIP05156 583 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ATXN1LP0C7T5 689 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 ESRRAP11474 423 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 KRT10P13645 584 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 DGKEP52429 567 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 GP2P55259 537 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 DMC1Q14565 340 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 DUOXA1Q1HG43 343 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ABHD15Q6UXT9 468 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 LPCAT2Q7L5N7 544 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 DTX1Q86Y01 620 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 CCDC60Q8IWA6 550 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 TMEM57Q8N5G2 664 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ZSCAN18Q8TBC5 510 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 ASAP3Q8TDY4 903 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ZNF668Q96K58 619 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 CNOT6LQ96LI5 555 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 LRRC3BQ96PB8 259 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 MAP7D2Q96T17 732 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 TPSD1Q9BZJ3 242 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 SOX17Q9H6I2 414 aaPredicted RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 SNTG2Q9NY99 539 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ADAM28Q9UKQ2 775 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 AKT3Q9Y243 479 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 GTF3C3Q9Y5Q9 886 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ATXN2Q99700 1313 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 PCNX1Q96RV3 2341 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 LOC100289279A0A1B0GTE1 492 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 PLK4O00444 970 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 ZNF197O14709 1029 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 MEIS2O14770 477 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 MAGEB2O15479 319 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 TIAF1O95411 115 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 CCNE2O96020 404 aa3.66□□□□□ -1.82
PMS1-215ENST00000447232 PARP1P09874 1014 aaKnown RBP3.66□□□□□ -1.82
PMS1-215ENST00000447232 ITPKAP23677 461 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms