RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 WHAMMQ8TF30 809 aa23.4■■□□□ 1.34
APOE-204ENST00000446996 SEPT5Q99719 369 aaPredicted RBP23.4■■□□□ 1.34
APOE-204ENST00000446996 INTS2Q9H0H0 1204 aaKnown RBP23.4■■□□□ 1.34
APOE-204ENST00000446996 GCNT4Q9P109 453 aa23.4■■□□□ 1.34
APOE-204ENST00000446996 CEP72Q9P209 647 aa23.4■■□□□ 1.34
APOE-204ENST00000446996 LIMA1Q9UHB6 759 aaKnown RBP23.4■■□□□ 1.34
APOE-204ENST00000446996 ATP8B3O60423 1300 aa23.39■■□□□ 1.34
APOE-204ENST00000446996 LOC730098B7Z3J9 87 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 ZP2Q05996 745 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 VEPH1Q14D04 833 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 HSP90AA4PQ58FG1 418 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 ENOSF1Q7L5Y1 443 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 GRASPQ7Z6J2 395 aaPredicted RBP23.39■■□□□ 1.33
APOE-204ENST00000446996 AOPEPQ8N6M6 819 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 TTC9BQ8N6N2 239 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 UBR7Q8N806 425 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 FEZF2Q8TBJ5 459 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 PSMG2Q969U7 264 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 ELOVL4Q9GZR5 314 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 CDH22Q9UJ99 828 aa23.39■■□□□ 1.33
APOE-204ENST00000446996 ZFP37Q9Y6Q3 630 aaPredicted RBP23.39■■□□□ 1.33
APOE-204ENST00000446996 ZNF197O14709 1029 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 CD58P19256 250 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 CYP2F1P24903 491 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 CYP27A1Q02318 531 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 LRMPQ12912 555 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 KRT31Q15323 416 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 PABPC1LQ4VXU2 614 aaKnown RBP23.38■■□□□ 1.33
APOE-204ENST00000446996 TRIM65Q6PJ69 517 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 OTOP3Q7RTS5 596 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 ACOT1Q86TX2 421 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 PLCD3Q8N3E9 789 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 ADAMTS19Q8TE59 1207 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 ACSF2Q96CM8 615 aaPredicted RBP23.38■■□□□ 1.33
APOE-204ENST00000446996 B3GNT5Q9BYG0 378 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 HSD3B7Q9H2F3 369 aa23.38■■□□□ 1.33
APOE-204ENST00000446996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.38■■□□□ 1.337e-6■■■■□ 21.3
APOE-204ENST00000446996 TRIM66O15016 1216 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 FGF19O95750 216 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 RHOP08100 348 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 CSH1P0DML2 217 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 CSH2P0DML3 217 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 ATF6P18850 670 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 CDK11BP21127 795 aaKnown RBP23.37■■□□□ 1.33
APOE-204ENST00000446996 FSHRP23945 695 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 IQCB1Q15051 598 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 CYP4A22Q5TCH4 519 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 PHLDB3Q6NSJ2 640 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 DNAJB7Q7Z6W7 309 aaPredicted RBP23.37■■□□□ 1.33
APOE-204ENST00000446996 DHX40Q8IX18 779 aaKnown RBP23.37■■□□□ 1.33
APOE-204ENST00000446996 PPM1KQ8N3J5 372 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 TMEM176AQ96HP8 235 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 SPATA17Q96L03 361 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 C8orf48Q96LL4 319 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 TWNKQ96RR1 684 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 HNRNPABQ99729 332 aaKnown RBP23.37■■□□□ 1.33
APOE-204ENST00000446996 ARID3AQ99856 593 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 LRRC3Q9BY71 257 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 HMGXB4Q9UGU5 601 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 KIAA1257Q9ULG3 409 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 DOCK8Q8NF50 2099 aa23.37■■□□□ 1.33
APOE-204ENST00000446996 BECN2A8MW95 431 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 BDNFP23560 247 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 PON1P27169 355 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 CCDC142Q17RM4 750 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 PAQR9Q6ZVX9 377 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 ZDHHC14Q8IZN3 488 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 CORO1BQ9BR76 489 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 CRACR2AQ9BSW2 395 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 ASAH2Q9NR71 780 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 HCFC1R1Q9NWW0 138 aa23.36■■□□□ 1.33
APOE-204ENST00000446996 GREB1Q4ZG55 1949 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 SLC9A1P19634 815 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 ACO1P21399 889 aaKnown RBP23.35■■□□□ 1.33
APOE-204ENST00000446996 RAD23BP54727 409 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 PRSS36Q5K4E3 855 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 PDZD4Q76G19 769 aaPredicted RBP23.35■■□□□ 1.33
APOE-204ENST00000446996 ARHGEF19Q8IW93 802 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 FUKQ8N0W3 1084 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 SLC4A11Q8NBS3 891 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 FAM200AQ8TCP9 573 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 SMARCD1Q96GM5 515 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 UHRF1Q96T88 793 aaPredicted RBP23.35■■□□□ 1.33
APOE-204ENST00000446996 TAB2Q9NYJ8 693 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 EHD2Q9NZN4 543 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 APEX2Q9UBZ4 518 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 CNTN6Q9UQ52 1028 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 NCOR1O75376 2440 aa23.35■■□□□ 1.33
APOE-204ENST00000446996 MYH10P35580 1976 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 SOAT2O75908 522 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 PAEPP09466 180 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 ANXA13P27216 316 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 GRIK1P39086 918 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 COPB1P53618 953 aaKnown RBP23.34■■□□□ 1.33
APOE-204ENST00000446996 MFAP3P55082 362 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 NTHL1P78549 312 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 TAF12Q16514 161 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 ARHGAP17Q68EM7 881 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 FAM35AQ86V20 835 aa23.34■■□□□ 1.33
APOE-204ENST00000446996 TMC8Q8IU68 726 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms