RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 UBQLN1Q9UMX0 589 aaKnown RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 IPPQ9Y573 584 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRRD1A4D1F6 860 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 A8MXQ7 604 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 HCRTO43612 131 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GRAP2O75791 330 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 STAU1O95793 577 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CYP3A5P20815 502 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CDR1P51861 262 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 DRG2P55039 364 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 PRKCZQ05513 592 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ADCY2Q08462 1091 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 TTMPQ5BVD1 217 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZDHHC24Q6UX98 284 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 MFSD7Q6UXD7 560 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GSTA5Q7RTV2 222 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 SH2D3CQ8N5H7 860 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM76AQ8TAV0 307 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 RAPGEF5Q92565 580 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 HAUS1Q96CS2 278 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 RBM41Q96IZ5 413 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 SLITRK1Q96PX8 696 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GRHL1Q9NZI5 618 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 WDR35Q9P2L0 1181 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 KIAA1257Q9ULG3 409 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CDY2AQ9Y6F7 541 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 KAT6AQ92794 2004 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZNF236Q9UL36 1845 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA6L10A6NI86 522 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 E5RJQ4 531 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CD4P01730 458 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 RARBP10826 455 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CYBAP13498 195 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GJA9P57773 515 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 KLF1Q13351 362 aaPredicted RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 MTMR3Q13615 1198 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 SOWAHAQ2M3V2 549 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 GDF6Q6KF10 455 aaPredicted RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM228AQ86W67 206 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 TTC39CQ8N584 583 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ARRDC4Q8NCT1 418 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 ATL2Q8NHH9 583 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 DPEP3Q9H4B8 488 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 BCCIPQ9P287 314 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 MTRF1LQ9UGC7 380 aaKnown RBP10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 LCMT1Q9UIC8 334 aa10.04□□□□□ -0.8
COL6A4P1-201ENST00000446690 MGAMO43451 1857 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ANK1P16157 1881 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 KPNA7A9QM74 516 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 KPNA6O60684 536 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 TJP3O95049 919 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 GAS8O95995 478 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 IGHA2P01877 340 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ADCY8P40145 1251 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 PMS2P54278 862 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 DYNLT1P63172 113 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 IFFO1Q0D2I5 559 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 HADHQ16836 314 aaKnown RBP10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZNF618Q5T7W0 954 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 PRUNE1Q86TP1 453 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ARFGAP1Q8N6T3 406 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRRC52Q8N7C0 313 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 GRK7Q8WTQ7 553 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZFP42Q96MM3 310 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 HOMER3Q9NSC5 361 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 HESX1Q9UBX0 185 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 GTF2IRD1Q9UHL9 959 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZSWIM8A7E2V4 1837 aa10.03□□□□□ -0.8
COL6A4P1-201ENST00000446690 SPTLC1O15269 473 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 XPOTO43592 962 aaKnown RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRCH4O75427 683 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 RPS6KA5O75582 802 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 RNF8O76064 485 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 PFKMP08237 780 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 LMO2P25791 158 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 ADORA2BP29275 332 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 MRPS6P82932 125 aaKnown RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 PLCB3Q01970 1234 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 PPARDQ03181 441 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 SOX4Q06945 474 aaPredicted RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 CACNB2Q08289 660 aaPredicted RBP10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 CCNG2Q16589 344 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 CDO1Q16878 200 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRRC38Q5VT99 294 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 PMF1Q6P1K2 205 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM183BPQ6ZVS7 135 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZNF365Q70YC5 407 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 RSPH3Q86UC2 560 aa10.02□□□□□ -0.8
COL6A4P1-201ENST00000446690 SCUBE3Q8IX30 993 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms