RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SPATA18Q8TC71 538 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 MCEEQ96PE7 176 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 RSAD1Q9HA92 442 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 GTF3C4Q9UKN8 822 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 HUS1O60921 280 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 RGS2P41220 211 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 AQP5P55064 265 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ARMCX4Q5H9R4 360 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ARHGEF38Q9NXL2 777 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 RGS5O15539 181 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 TRAPPC3O43617 180 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 NBNO60934 754 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF23P17027 643 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 CSTF3Q12996 717 aaKnown RBP19.37■□□□□ 0.69
SHANK3-203ENST00000445220 HHIPL2Q6UWX4 724 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 ELMO2Q96JJ3 720 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
SHANK3-203ENST00000445220 SFMBT1Q9UHJ3 866 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 GGA2Q9UJY4 613 aa19.37■□□□□ 0.69
SHANK3-203ENST00000445220 SPATA31A5Q5VU36 1347 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 SPATA31A7Q8IWB4 1347 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 CST8O60676 142 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 C21orf59P57076 290 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 KCNV1Q6PIU1 500 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 ZBTB49Q6ZSB9 765 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 PHF21AQ96BD5 680 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF184Q99676 751 aaPredicted RBP19.36■□□□□ 0.69
SHANK3-203ENST00000445220 KCND2Q9NZV8 630 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 SOX11P35716 441 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 PTK2BQ14289 1009 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 SLC10A5Q5PT55 438 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 EFL1Q7Z2Z2 1120 aaKnown RBP19.36■□□□□ 0.69
SHANK3-203ENST00000445220 PCDHB2Q9Y5E7 798 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 TM9SF1O15321 606 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 ZCCHC7Q8N3Z6 543 aaKnown RBP19.36■□□□□ 0.69
SHANK3-203ENST00000445220 RNPEPQ9H4A4 650 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 METTL5Q9NRN9 209 aaKnown RBP19.36■□□□□ 0.69
SHANK3-203ENST00000445220 SOX13Q9UN79 622 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 GSNP06396 782 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 EFNA5P52803 228 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 PCNX4Q63HM2 1172 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 C16orf86Q6ZW13 317 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 BBS7Q8IWZ6 715 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 REEP2Q9BRK0 252 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 SLC24A2Q9UI40 661 aa19.36■□□□□ 0.69
SHANK3-203ENST00000445220 KDM6AO15550 1401 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 SRRM3A6NNA2 597 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 P4HA2O15460 535 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 ATMINO43313 823 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 PDGFRAP16234 1089 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 TRIM25Q14258 630 aaKnown RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 ASAP3Q8TDY4 903 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 LPAR1Q92633 364 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 AGAP3Q96P47 875 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 PPP1R16BQ96T49 567 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 COPG2Q9UBF2 871 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 ANTXR2P58335 489 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 NME3Q13232 169 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 KCTD21Q4G0X4 260 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 THEM5Q8N1Q8 247 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 GDPD5Q8WTR4 605 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 RMND5BQ96G75 393 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 TMEM79Q9BSE2 394 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 C17orf80Q9BSJ5 609 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 V9GYQ6 96 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 TRIM24O15164 1050 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 H2AFYO75367 372 aaKnown RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 NTSR2O95665 410 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF844Q08AG5 666 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 CCDC80Q76M96 950 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 PDCD6IPQ8WUM4 868 aaKnown RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 RNPEPL1Q9HAU8 725 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF197O14709 1029 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 GSTT1P30711 240 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 SERPINB5P36952 375 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 RSBN1Q5VWQ0 802 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 THAP2Q9H0W7 228 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 SP110Q9HB58 689 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 RIC8BQ9NVN3 520 aa19.35■□□□□ 0.69
SHANK3-203ENST00000445220 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
SHANK3-203ENST00000445220 C1orf232A0A0U1RR37 186 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 DNALI1O14645 258 aaPredicted RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 TLR2O60603 784 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 Q4G0T1 1027 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 FAM217BQ9NTX9 383 aaPredicted RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 HPSEQ9Y251 543 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 RNF103O00237 685 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 NFX1Q12986 1120 aaKnown RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 ZNF677Q86XU0 584 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 CYP39A1Q9NYL5 469 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 CD44P16070 742 aaKnown RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 EPHB2P29323 1055 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 SARSP49591 514 aaKnown RBP19.34■□□□□ 0.69
SHANK3-203ENST00000445220 PRR5LQ6MZQ0 368 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 B3GNT6Q6ZMB0 384 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 NDFIP2Q9NV92 336 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 DCDC2Q9UHG0 476 aa19.34■□□□□ 0.69
SHANK3-203ENST00000445220 TOMM70O94826 608 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms