RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 SEC24BO95487 1268 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 OR52Z1P0C646 297 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 ITPKAP23677 461 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 PAX3P23760 479 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SMARCB1Q12824 385 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 TAF12Q16514 161 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SPATA1Q5VX52 437 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 ZPBP2Q6X784 338 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 HDDC3Q8N4P3 179 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 CCDC33Q8N5R6 958 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 TMEM161BQ8NDZ6 487 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SPPL2BQ8TCT7 592 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 WHAMMQ8TF30 809 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 MRPS31Q92665 395 aaKnown RBP10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SPACA7Q96KW9 195 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SLC22A12Q96S37 553 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 RUSC1Q9BVN2 902 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 TMEM206Q9H813 350 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 C17orf75Q9HAS0 396 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 DNAAF2Q9NVR5 837 aaKnown RBP10.9□□□□□ -0.66
COMMD1-203ENST00000444166 SLC6A14Q9UN76 642 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 RAXQ9Y2V3 346 aa10.9□□□□□ -0.66
COMMD1-203ENST00000444166 CLDN3O15551 220 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 EPB41L2O43491 1005 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 OPHN1O60890 802 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 GJB3O75712 270 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 REC8O95072 547 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 CFIP05156 583 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 SERPINF2P08697 491 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 MAPTP10636 758 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 TCF3P15923 654 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 CCT6AP40227 531 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 TNFSF9P41273 254 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 IFNAR2P48551 515 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 SEC13P55735 322 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 MRPS21P82921 87 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 PPP2R3AQ06190 1150 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 ENOX2Q16206 610 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 DUOXA1Q1HG43 343 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 LMBRD2Q68DH5 695 aaPredicted RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 EFCAB13Q8IY85 973 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 STKLD1Q8NE28 680 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 OR2I1PQ8NGU4 316 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 CEP76Q8TAP6 659 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 MDM1Q8TC05 714 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 MYRFLQ96LU7 910 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 DRC1Q96MC2 740 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 GTPBP2Q9BX10 602 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 LINC00597Q9H2U6 94 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 DDX19AQ9NUU7 478 aaKnown RBP10.89□□□□□ -0.67
COMMD1-203ENST00000444166 DKK4Q9UBT3 224 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 KIAA1024Q9UPX6 916 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
COMMD1-203ENST00000444166 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ANO9A1A5B4 782 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 SGK1O00141 431 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 PIRO00625 290 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 MAP3K13O43283 966 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 XPOTO43592 962 aaKnown RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ALDH1A2O94788 518 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 FTH1P19P0C7X4 201 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 CSH1P0DML2 217 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 CSH2P0DML3 217 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 GPR15P49685 360 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ATXN3P54252 364 aaPredicted RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 MESP2Q0VG99 397 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 STRN3Q13033 797 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 NR1H3Q13133 447 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 C9orf57Q5W0N0 161 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 RINT1Q6NUQ1 792 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 C1orf186Q6ZWK4 172 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 SFTPA1Q8IWL2 248 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 IL17RCQ8NAC3 791 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 KCNN1Q92952 543 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 TRMT2BQ96GJ1 504 aaKnown RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 LRIG1Q96JA1 1093 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 CAMK1GQ96NX5 476 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 CYP2S1Q96SQ9 504 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 TMLHEQ9NVH6 421 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 ABI2Q9NYB9 513 aaPredicted RBP10.88□□□□□ -0.67
COMMD1-203ENST00000444166 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 DSEQ9UL01 958 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 PTPRBP23467 1997 aa10.88□□□□□ -0.67
COMMD1-203ENST00000444166 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
COMMD1-203ENST00000444166 E9PMD0 336 aa10.87□□□□□ -0.67
COMMD1-203ENST00000444166 ARHGAP33O14559 1287 aa10.87□□□□□ -0.67
COMMD1-203ENST00000444166 SH3BP5O60239 455 aa10.87□□□□□ -0.67
COMMD1-203ENST00000444166 ADAM23O75077 832 aa10.87□□□□□ -0.67
COMMD1-203ENST00000444166 NOL4O94818 638 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms