RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 KRT82Q9NSB4 513 aa14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 LMCD1Q9NZU5 365 aa14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 CAPN11Q9UMQ6 739 aa14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 CNTN6Q9UQ52 1028 aa14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 SLC27A5Q9Y2P5 690 aa14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 LUC7L2Q9Y383 392 aaKnown RBP14.41□□□□□ -0.1
TM9SF4-204ENST00000442842 FAM170AA1A519 330 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 M0QYV0 167 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 PRRG1O14668 218 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 MFAP3LO75121 409 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 SOAT2O75908 522 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 BDNFP23560 247 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 CDC25BP30305 580 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 CLCN1P35523 988 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 KRT9P35527 623 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 ZBED6P86452 979 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 RBM10P98175 930 aaKnown RBP14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 PTK2Q05397 1052 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 HYAL1Q12794 435 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 DUSP4Q13115 394 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 PPP1R26Q5T8A7 1209 aaPredicted RBP14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 SFMBT2Q5VUG0 894 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 TPGS2Q68CL5 300 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 FAM171BQ6P995 826 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 EP400NLQ6ZTU2 488 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 TTC9BQ8N6N2 239 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 KREMEN2Q8NCW0 462 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 SPPL2BQ8TCT7 592 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 TFAP2BQ92481 460 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 ANP32BQ92688 251 aaKnown RBP14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 CDCA3Q99618 268 aaPredicted RBP14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 EDEM3Q9BZQ6 932 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 CRISPLD1Q9H336 500 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 AFF4Q9UHB7 1163 aaKnown RBP14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 FBXW11Q9UKB1 542 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 TSPAN16Q9UKR8 245 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 HCFC2Q9Y5Z7 792 aa14.4□□□□□ -0.1
TM9SF4-204ENST00000442842 AKR1B15C9JRZ8 316 aaPredicted RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 LINC01565O15544 149 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 MED7O43513 233 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 AP1G2O75843 785 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 MICAL2O94851 1124 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 SEC24AO95486 1093 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 VNN2O95498 520 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 C8AP07357 584 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 ATF2P15336 505 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 CYP11B1P15538 503 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 FERP16591 822 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 CYP2F1P24903 491 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 ADKP55263 362 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 TDRD12Q587J7 1177 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 E4F1Q66K89 784 aaPredicted RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 NOP9Q86U38 636 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 PASD1Q8IV76 773 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 SCN4BQ8IWT1 228 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 FUKQ8N0W3 1084 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 ZNF461Q8TAF7 563 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 SLC20A1Q8WUM9 679 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 PPM1EQ8WY54 764 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 SEPT11Q9NVA2 429 aaKnown RBP14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 HESX1Q9UBX0 185 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 MYO6Q9UM54 1294 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 YIPF1Q9Y548 306 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 TRANK1O15050 2925 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 TRIOBPQ9H2D6 2365 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 ATG2AQ2TAZ0 1938 aa14.39□□□□□ -0.11
TM9SF4-204ENST00000442842 SZT2Q5T011 3432 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 GOLGA6L6A8MZA4 724 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 O00370 1275 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 ABLIM3O94929 683 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 GRIK1P39086 918 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 GPR15P49685 360 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 CACNA2D1P54289 1103 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 BPIFB4P59827 614 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 SMARCB1Q12824 385 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 SKIV2LQ15477 1246 aaKnown RBP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 CCDC85BQ15834 202 aaPredicted RBP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 CFAP221Q4G0U5 840 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 SDHAF4Q5VUM1 108 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 ARHGAP17Q68EM7 881 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 STKLD1Q8NE28 680 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 VN1R2Q8NFZ6 395 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 EPS8L1Q8TE68 723 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 SLC22A17Q8WUG5 538 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 SMARCD1Q96GM5 515 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 ZSWIM1Q9BR11 485 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 NUCKS1Q9H1E3 243 aaKnown RBP14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 ABHD10Q9NUJ1 306 aa14.38□□□□□ -0.11
TM9SF4-204ENST00000442842 MTMR10Q9NXD2 777 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms