RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, human

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-210	ENST00000442419	PARM1	Q6UWI2	310 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	LRRC8A	Q8IWT6	810 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	EFCAB13	Q8IY85	973 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	HACE1	Q8IYU2	909 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	NEK11	Q8NG66	645 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	CACTIN	Q8WUQ7	758 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	FAXDC2	Q96IV6	333 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	FAM81B	Q96LP2	452 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	PANX2	Q96RD6	677 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	DNAJC7	Q99615	494 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	CRACR2A	Q9BSW2	395 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	RPP25	Q9BUL9	199 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	LSM14B	Q9BX40	385 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	NAA15	Q9BXJ9	866 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	TRIM6	Q9C030	488 aa	Predicted RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	INTS2	Q9H0H0	1204 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	NUCKS1	Q9H1E3	243 aa	Known RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	MMRN2	Q9H8L6	949 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	RSAD1	Q9HA92	442 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	CHST7	Q9NS84	486 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	RAB20	Q9NX57	234 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	SNTG2	Q9NY99	539 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	GCNT4	Q9P109	453 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	CNTN3	Q9P232	1028 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	ANGPTL2	Q9UKU9	493 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	RAB23	Q9ULC3	237 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	MTF2	Q9Y483	593 aa	Predicted RBP	12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	IPP	Q9Y573	584 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	PCDHB2	Q9Y5E7	798 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	ASPM	Q8IZT6	3477 aa		12.49	□□□□□ -0.41
SNHG11-210	ENST00000442419	PATJ	Q8NI35	1801 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	RNF225	M0QZC1	329 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	EPHB6	O15197	1021 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	TGM5	O43548	720 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	FOXD2	O60548	495 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	ZMYND10	O75800	440 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	PTMA	P06454	111 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	RET	P07949	1114 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	UCHL3	P15374	230 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	CASP14	P31944	242 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	YARS	P54577	528 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	NRL	P54845	237 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	OSTN	P61366	133 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	CREM	Q03060	361 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	TDRD10	Q5VZ19	366 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	MAMSTR	Q6ZN01	415 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	TAS1R1	Q7RTX1	841 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	TRAPPC11	Q7Z392	1133 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	CELF5	Q8N6W0	485 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	OR5B17	Q8NGF7	314 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	OR8K1	Q8NGG5	319 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	TAS1R2	Q8TE23	839 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	BAP1	Q92560	729 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	SYN2	Q92777	582 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	SEMA4D	Q92854	862 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	IER2	Q9BTL4	223 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	NXF3	Q9H4D5	531 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	VRTN	Q9H8Y1	702 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	UBN1	Q9NPG3	1134 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	FNIP2	Q9P278	1114 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	APEX2	Q9UBZ4	518 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	GIT1	Q9Y2X7	761 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	LUC7L2	Q9Y383	392 aa	Known RBP	12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	MIA3	Q5JRA6	1907 aa		12.48	□□□□□ -0.41
SNHG11-210	ENST00000442419	RECQL4	O94761	1208 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	VNN1	O95497	513 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	STAU1	O95793	577 aa	Known RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	HLA-DRA	P01903	254 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	SPATA31D3	P0C874	917 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	CYP3A5	P20815	502 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	KRT9	P35527	623 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	AFF1	P51825	1210 aa	Known RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	SHC2	P98077	582 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	CDK17	Q00537	523 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	SPEM2	Q0P670	501 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	COL9A2	Q14055	689 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	MEA1	Q16626	185 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	SPATA31D4	Q6ZUB0	917 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	COLGALT2	Q8IYK4	626 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	CCDC112	Q8NEF3	446 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	ZNF397	Q8NF99	534 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	CXorf38	Q8TB03	319 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	ANKRD36BP1	Q96IX9	119 aa		12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	MRPS17	Q9Y2R5	130 aa	Known RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.47	□□□□□ -0.41
SNHG11-210	ENST00000442419	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	ASS1	P00966	412 aa	Known RBP	12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	POMC	P01189	267 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	TNNC2	P02585	160 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	NFIC	P08651	508 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	HNRNPA1	P09651	372 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	TDGF1	P13385	188 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	TARS	P26639	723 aa	Known RBP	12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	PML	P29590	882 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	OR1G1	P47890	313 aa		12.46	□□□□□ -0.41
SNHG11-210	ENST00000442419	ADK	P55263	362 aa	Known RBP	12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms