RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 IGSF9Q9P2J2 1179 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 CDH7Q9ULB5 785 aa16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.16
CSNK1E-210ENST00000442216 NUP210Q8TEM1 1887 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 TRIM66O15016 1216 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 CILPO75339 1184 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 SOAT2O75908 522 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 CSH1P0DML2 217 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 CSH2P0DML3 217 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 LAMP2P13473 410 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 SP100P23497 879 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 CYP27A1Q02318 531 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 MDH1BQ5I0G3 518 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 CAVIN1Q6NZI2 390 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 TMC8Q8IU68 726 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 EHBP1Q8NDI1 1231 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 LMO3Q8TAP4 145 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 FGF13Q92913 245 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 TATDN2Q93075 761 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 SPATA17Q96L03 361 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 NT5C1AQ9BXI3 368 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 GPR88Q9GZN0 384 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 ELOVL4Q9GZR5 314 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 ANAPC1Q9H1A4 1944 aa16.01■□□□□ 0.15
CSNK1E-210ENST00000442216 GTPBP10A4D1E9 387 aaKnown RBP16■□□□□ 0.15
CSNK1E-210ENST00000442216 ALADP13716 330 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 BDNFP23560 247 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 MTIF2P46199 727 aaKnown RBP16■□□□□ 0.15
CSNK1E-210ENST00000442216 CUL2Q13617 745 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 TAF12Q16514 161 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 MAN2A1Q16706 1144 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 CCDC142Q17RM4 750 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 SLC5A9Q2M3M2 681 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 ACOT1Q86TX2 421 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 HS6ST3Q8IZP7 471 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 ITFG1Q8TB96 612 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 TRMT2BQ96GJ1 504 aaKnown RBP16■□□□□ 0.15
CSNK1E-210ENST00000442216 C8orf48Q96LL4 319 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 NT5C1BQ96P26 610 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 LPIN3Q9BQK8 851 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.15
CSNK1E-210ENST00000442216 UXTQ9UBK9 157 aaPredicted RBP16■□□□□ 0.15
CSNK1E-210ENST00000442216 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 PATJQ8NI35 1801 aa16■□□□□ 0.15
CSNK1E-210ENST00000442216 PI4K2BG5E9Z4 385 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 MYL4P12829 197 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 EEF1GP26641 437 aaKnown RBP15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 ANXA13P27216 316 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 GRIK1P39086 918 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 TYRO3Q06418 890 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 MTSS1LQ765P7 747 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 NPAS3Q8IXF0 933 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 WHAMMQ8TF30 809 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 B3GNT5Q9BYG0 378 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 CISHQ9NSE2 258 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 EHD2Q9NZN4 543 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 LIMD1Q9UGP4 676 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 ZMYM5Q9UJ78 669 aa15.99■□□□□ 0.15
CSNK1E-210ENST00000442216 SOBPA7XYQ1 873 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 ANHXE9PGG2 379 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 DCXO43602 365 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 MOSPD3O75425 235 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 NOL4O94818 638 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 HMGA1P17096 107 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 CD58P19256 250 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 CDC25CP30307 473 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 CCR2P41597 374 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 GCNT1Q02742 428 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 PTPN21Q16825 1174 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 DDR2Q16832 855 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 SCN4BQ8IWT1 228 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 GIPC2Q8TF65 315 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 TCEAL4Q96EI5 215 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 SMARCD1Q96GM5 515 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 FAM81BQ96LP2 452 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 TWNKQ96RR1 684 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 TUBGCP2Q9BSJ2 902 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 NAT10Q9H0A0 1025 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 ZNF334Q9HCZ1 680 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 HMGXB4Q9UGU5 601 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 SORCS3Q9UPU3 1222 aa15.98■□□□□ 0.15
CSNK1E-210ENST00000442216 A0A0C4DFX4 3053 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 SLC38A8A6NNN8 435 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 KCNJ18B7U540 433 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 CEBPBP17676 345 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GABRR2P28476 465 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 GPR15P49685 360 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 CDR1P51861 262 aa15.97■□□□□ 0.15
CSNK1E-210ENST00000442216 MYL5Q02045 173 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms