RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 FAR2Q96K12 515 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ASPSCR1Q9BZE9 553 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 C20orf96Q9NUD7 363 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 FNDC3AQ9Y2H6 1198 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 DDTLA6NHG4 134 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 ANXA9O76027 345 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 ANP32DO95626 131 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 PGM5Q15124 567 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 KBTBD12Q3ZCT8 623 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 PRPF39Q86UA1 669 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 CCDC134Q9H6E4 229 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 RXFP1Q9HBX9 757 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 CNGA3Q16281 694 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 SMTNL2Q2TAL5 461 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 TAS1R2Q8TE23 839 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 CYTH3O43739 400 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 SASH3O75995 380 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 MYO1DO94832 1006 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 MOCS2O96007 188 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 RRM1P23921 792 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 GRIK1P39086 918 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 PSMC6P62333 389 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 RNF219Q5W0B1 726 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 DCP1BQ8IZD4 617 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 CNPY3Q9BT09 278 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 GGA2Q9UJY4 613 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 ROBO3Q96MS0 1386 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 MAPRE1Q15691 268 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
BRPF3-203ENST00000441123 UBA3Q8TBC4 463 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
BRPF3-203ENST00000441123 DDX3XO00571 662 aaKnown RBP eCLIP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 ITGA4P13612 1032 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 IFNA8P32881 189 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SERPINB8P50452 374 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 IRX1P78414 480 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 NLRP9Q7RTR0 991 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 GPRC5AQ8NFJ5 357 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SNX19Q92543 992 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SIKE1Q9BRV8 207 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 BCL9LQ86UU0 1499 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 FAM86B1E9PN63 330 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 FAM86B2P0C5J1 330 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 PTGER2P43116 358 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 VCPP55072 806 aaKnown RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 ERVK-9P63128 1117 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 ZNF844Q08AG5 666 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 DNAJC3Q13217 504 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 PRDM16Q9HAZ2 1276 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 HOXD10P28358 340 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 RARRES1P49788 294 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 PDAP1Q13442 181 aaKnown RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 TMED1Q13445 227 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 CCDC126Q96EE4 140 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
BRPF3-203ENST00000441123 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 BMP6P22004 513 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 CALB2P22676 271 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 COPAP53621 1224 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 ZDHHC17Q8IUH5 632 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 CXorf38Q8TB03 319 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 ATG4AQ8WYN0 398 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 PDP2Q9P2J9 529 aa13.41□□□□□ -0.26
BRPF3-203ENST00000441123 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 FBXO21O94952 628 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 PBX1P40424 430 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 ACAP1Q15027 740 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 TBCBQ99426 244 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 PAFAH2Q99487 392 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.4□□□□□ -0.26
BRPF3-203ENST00000441123 UBA6A0AVT1 1052 aaPredicted RBP13.4□□□□□ -0.26
BRPF3-203ENST00000441123 SDR42E2A6NKP2 422 aa13.4□□□□□ -0.26
BRPF3-203ENST00000441123 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
BRPF3-203ENST00000441123 TIMM44O43615 452 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms