RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CUEDC2Q9H467 287 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 CCL26Q9Y258 94 aa12.48□□□□□ -0.41
UBE2D4-204ENST00000440899 NUP210Q8TEM1 1887 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 SPTLC2O15270 562 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 HRO43593 1189 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 NOL4O94818 638 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 TNNC2P02585 160 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 DMWDQ09019 674 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 ZNF268Q14587 947 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 SDHAF4Q5VUM1 108 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 HEATR6Q6AI08 1181 aaKnown RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 SPATA2LQ8IUW3 424 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 FAM84AQ96KN4 292 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 MYRFLQ96LU7 910 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 ZNF396Q96N95 335 aaPredicted RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 PARD6AQ9NPB6 346 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 HPS4Q9NQG7 708 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
UBE2D4-204ENST00000440899 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 ATG13O75143 517 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 PPP6R2O75170 966 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 USP17L7P0C7H9 530 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 MAGEA11P43364 429 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 ATXN1P54253 815 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 SPEM2Q0P670 501 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 PDGFRLQ15198 375 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 MAPRE1Q15691 268 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 E2F4Q16254 413 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 TMEM196Q5HYL7 178 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 LMBRD2Q68DH5 695 aaPredicted RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 FAM171BQ6P995 826 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 WDR5BQ86VZ2 330 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 CBWD2Q8IUF1 395 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 STKLD1Q8NE28 680 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 GLIS3Q8NEA6 775 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 EXOC4Q96A65 974 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 TRIM9Q9C026 710 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 EBF3Q9H4W6 596 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 C2orf42Q9NWW7 574 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 HSPBP1Q9NZL4 362 aa12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
UBE2D4-204ENST00000440899 TCHHQ07283 1943 aa12.46□□□□□ -0.42
UBE2D4-204ENST00000440899 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 OTOL1A6NHN0 477 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CUTAO60888 179 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 TADA3O75528 432 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 ARSAP15289 507 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 DRD1P21728 446 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 HOXD13P35453 343 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 ASIC1P78348 528 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CCDC142Q17RM4 750 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 TRIM68Q6AZZ1 485 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 FSTL4Q6MZW2 842 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CEP68Q76N32 757 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 EPM2AIP1Q7L775 607 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 WDR49Q8IV35 697 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 SCN4BQ8IWT1 228 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 HPS3Q969F9 1004 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CEP295NLQ96MC4 621 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 RTKNQ9BST9 563 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 TRPC7Q9HCX4 862 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 MAGEC2Q9UBF1 373 aaPredicted RBP12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 CDH9Q9ULB4 789 aa12.45□□□□□ -0.42
UBE2D4-204ENST00000440899 PTPRJQ12913 1337 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 HCRTO43612 131 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 FOXD2O60548 495 aaPredicted RBP12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 ATP2C2O75185 946 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 YEATS4O95619 227 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 CKMP06732 381 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 FAM163BP0C2L3 166 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 WARSP23381 471 aaKnown RBP12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 LMO2P25791 158 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms