RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 BDNFP23560 247 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 EPHA5P54756 1037 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 INCA1Q0VD86 236 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 KCNH2Q12809 1159 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 LRMPQ12912 555 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 STX1AQ16623 288 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 ACOT1Q86TX2 421 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 SCN4BQ8IWT1 228 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 PLCD3Q8N3E9 789 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 CYP3A43Q9HB55 503 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 AVENQ9NQS1 362 aaPredicted RBP19.22■□□□□ 0.67
CPSF4-205ENST00000440514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.22■□□□□ 0.67
CPSF4-205ENST00000440514 EPS15L1Q9UBC2 864 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 CDH7Q9ULB5 785 aa19.22■□□□□ 0.67
CPSF4-205ENST00000440514 CLDN5O00501 218 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 MOSPD3O75425 235 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 CACNA2D1P54289 1103 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 MTMR3Q13615 1198 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 CT47A1Q5JQC4 288 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-205ENST00000440514 CYP4A22Q5TCH4 519 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 POTEHQ6S545 545 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 DNAJB7Q7Z6W7 309 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-205ENST00000440514 ITIH5Q86UX2 942 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 TNIP3Q96KP6 325 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 B3GNT5Q9BYG0 378 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 ZNF518BQ9C0D4 1074 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 THAP9Q9H5L6 903 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 ASB3Q9Y575 518 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 MUC3AQ02505 3323 aa19.21■□□□□ 0.67
CPSF4-205ENST00000440514 PMM2O15305 246 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 CILPO75339 1184 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 LAMP2P13473 410 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 CCDC130P13994 396 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 MAGEA11P43364 429 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 MTIF2P46199 727 aaKnown RBP19.2■□□□□ 0.66
CPSF4-205ENST00000440514 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
CPSF4-205ENST00000440514 PTPN21Q16825 1174 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 FAM35AQ86V20 835 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 UNC93AQ86WB7 457 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 LEMD2Q8NC56 503 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 SHKBP1Q8TBC3 707 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 WHAMMQ8TF30 809 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 MCRS1Q96EZ8 462 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 ELOVL4Q9GZR5 314 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 CISHQ9NSE2 258 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 SAMSN1Q9NSI8 373 aaKnown RBP19.2■□□□□ 0.66
CPSF4-205ENST00000440514 FAM49BQ9NUQ9 324 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 TMEM30AQ9NV96 361 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 ANO10Q9NW15 660 aa19.2■□□□□ 0.66
CPSF4-205ENST00000440514 A0A1W2PRU2 124 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 ZNF197O14709 1029 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 P4HA2O15460 535 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 DCXO43602 365 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 TYRO3Q06418 890 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 CUL2Q13617 745 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 TEAD2Q15562 447 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 TAF12Q16514 161 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 KLHL40Q2TBA0 621 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 LMO3Q8TAP4 145 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 NT5C1BQ96P26 610 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 MED10Q9BTT4 135 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 INTS2Q9H0H0 1204 aaKnown RBP19.19■□□□□ 0.66
CPSF4-205ENST00000440514 SMOC2Q9H3U7 446 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 MAGED2Q9UNF1 606 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-205ENST00000440514 NFE2L3Q9Y4A8 694 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 OBSL1O75147 1896 aa19.19■□□□□ 0.66
CPSF4-205ENST00000440514 SLC38A8A6NNN8 435 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
CPSF4-205ENST00000440514 HMGA1P17096 107 aaKnown RBP19.18■□□□□ 0.66
CPSF4-205ENST00000440514 GABRR2P28476 465 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 GRIK1P39086 918 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 CYP4F8P98187 520 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 CETN1Q12798 172 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 HTR4Q13639 388 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 ZNF394Q53GI3 561 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 STXBP5Q5T5C0 1151 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 PAQR9Q6ZVX9 377 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 GAREM2Q75VX8 874 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 ARHGEF19Q8IW93 802 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 FAM114A1Q8IWE2 563 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 FUKQ8N0W3 1084 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 CRYBG2Q8N1P7 616 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 C12orf29Q8N999 325 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 NT5C1AQ9BXI3 368 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 EPHX3Q9H6B9 360 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 KCNK12Q9HB15 430 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 IL21Q9HBE4 155 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 KRT82Q9NSB4 513 aa19.18■□□□□ 0.66
CPSF4-205ENST00000440514 ZFP37Q9Y6Q3 630 aaPredicted RBP19.18■□□□□ 0.66
CPSF4-205ENST00000440514 KCNJ18B7U540 433 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 F8VP50 259 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 NOL4O94818 638 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 KCNJ12Q14500 433 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 PARM1Q6UWI2 310 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 ENOX1Q8TC92 643 aaKnown RBP19.17■□□□□ 0.66
CPSF4-205ENST00000440514 SLC2A14Q8TDB8 520 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 FGF14Q92915 247 aa19.17■□□□□ 0.66
CPSF4-205ENST00000440514 KAT5Q92993 513 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms