RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DPP3Q9NY33 737 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 C15orf41Q9Y2V0 281 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 SNX24Q9Y343 169 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 O00370 1275 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 PPFIA2O75334 1257 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 LSM8O95777 96 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 F2P00734 622 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 EIF3BP55884 814 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 DHX34Q14147 1143 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 ITIH4Q14624 930 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 PLEKHA7Q6IQ23 1121 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 SEC14L1Q92503 715 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 ZIC5Q96T25 663 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 FMO2Q99518 471 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 ELAC2Q9BQ52 826 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 ERP44Q9BS26 406 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 KLHL11Q9NVR0 708 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 SNTG2Q9NY99 539 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 HMGXB4Q9UGU5 601 aa14.92□□□□□ -0.02
LIMD1-202ENST00000440097 GNEQ9Y223 722 aaKnown RBP14.92□□□□□ -0.02
LIMD1-202ENST00000440097 MED7O43513 233 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 RARAP10276 462 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 HOXD8P13378 290 aaPredicted RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 RGS2P41220 211 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 CPT1AP50416 773 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 YARSP54577 528 aaKnown RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 GLRA4Q5JXX5 417 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 RGMBQ6NW40 437 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 HOOK3Q86VS8 718 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 RHOT1Q8IXI2 618 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 HEXIM2Q96MH2 286 aaKnown RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 TLDC2A0PJX2 215 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 PLTPP55058 493 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF200P98182 395 aaPredicted RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 PTP4A2Q12974 167 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 RIPK1Q13546 671 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 APBB1IPQ7Z5R6 666 aaPredicted RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 AGAP11Q8TF27 550 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 TXLNGYQ9BZA5 131 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 SDCBP2Q9H190 292 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 ADAM7Q9H2U9 754 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
LIMD1-202ENST00000440097 ABT1Q9ULW3 272 aaKnown RBP14.91□□□□□ -0.02
LIMD1-202ENST00000440097 SMIM23A6NLE4 172 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF865P0CJ78 1059 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 EIF4BP23588 611 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 RBP5P82980 135 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TTC27Q6P3X3 843 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TRPM8Q7Z2W7 1104 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 SAPCD2Q86UD0 394 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 EIF2AQ9BY44 585 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 EPB41L4BQ9H329 900 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ABCF3Q9NUQ8 709 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 SAMD15Q9P1V8 674 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 PIN4Q9Y237 131 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TREHO43280 583 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 MMP13P45452 471 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 RAD23BP54727 409 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TAS2R40P59535 323 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 IRX1P78414 480 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 NOTUMQ6P988 496 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 SLC27A1Q6PCB7 646 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ATG4AQ8WYN0 398 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 RNF25Q96BH1 459 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ZFYVE28Q9HCC9 887 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 MGAMO43451 1857 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 CFAP73A6NFT4 308 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 FAM187AA6NFU0 413 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 RALAP11233 206 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ATICP31939 592 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 PSEN2P49810 448 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 KCNJ2P63252 427 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 PTPN11Q06124 597 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 DCAF4L1Q3SXM0 396 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 KAZNQ674X7 775 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 BZW1Q7L1Q6 419 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 WDTC1Q8N5D0 677 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 SPDL1Q96EA4 605 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 TMEM176AQ96HP8 235 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 PRMT1Q99873 361 aaKnown RBP14.9□□□□□ -0.02
LIMD1-202ENST00000440097 FAM118BQ9BPY3 351 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 BCO2Q9BYV7 579 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ADAMTS10Q9H324 1103 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 BATF3Q9NR55 127 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 C2CD2Q9Y426 696 aa14.9□□□□□ -0.02
LIMD1-202ENST00000440097 PI4K2BG5E9Z4 385 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 M0QYV0 167 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 AKAP5P24588 427 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 CDC25CP30307 473 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 GCKP35557 465 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 COILP38432 576 aaPredicted RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 GRM5P41594 1212 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms