RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 DPP3Q9NY33 737 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 KANSL3Q9P2N6 904 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOCTQ9UK39 431 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 AJAP1Q9UKB5 411 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 ITGA11Q9UKX5 1188 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 KIAA1257Q9ULG3 409 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 NENFQ9UMX5 172 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PIN4Q9Y237 131 aaKnown RBP4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 GINS2Q9Y248 185 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 JRKLQ9Y4A0 524 aa4.24□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTPRJQ12913 1337 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 FRMPD3Q5JV73 1810 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A0U1RQG5 324 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MACROD2A1Z1Q3 448 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ANKRD62A6NC57 917 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ANKRD33BA6NCL7 494 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 KBTBD13C9JR72 458 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 DDX3XO00571 662 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 OIP5O43482 229 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MED7O43513 233 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MMP20O60882 483 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 URI1O94763 535 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MAP3K6O95382 1288 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLU7O95391 586 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LSM8O95777 96 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 KRT19P08727 400 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PAEPP09466 180 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM163BP0C2L3 166 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 TMEM253P0C7T8 217 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MYBL1P10243 752 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CYP11B1P15538 503 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CAPN2P17655 700 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CHRNB2P17787 502 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CYP3A5P20815 502 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ACO1P21399 889 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PAX3P23760 479 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 GTF2F1P35269 517 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 THPOP40225 353 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PNPLA4P41247 253 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 GALCP54803 685 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 HADHBP55084 474 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MYL6P60660 151 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 GPC5P78333 572 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF200P98182 395 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CLUL1Q15846 466 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 WHAMMP3Q1A5X7 153 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 XKR4Q5GH76 650 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LIN9Q5TKA1 542 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PAPD7Q5XG87 772 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF385CQ66K41 422 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LMBRD2Q68DH5 695 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 TWF2Q6IBS0 349 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 JADE1Q6IE81 842 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ACAD10Q6JQN1 1059 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PDE12Q6L8Q7 609 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 TMEM270Q6UE05 265 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 XKR5Q6UX68 686 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ALKAL1Q6UXT8 129 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 DNAJC14Q6Y2X3 702 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 C1orf229Q6ZS94 237 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC47A2Q86VL8 602 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CDR2LQ86X02 465 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 RHOT2Q8IXI1 618 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 EFCAB13Q8IY85 973 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPUSD2Q8IZ73 545 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SVOPQ8N4V2 548 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LRRC52Q8N7C0 313 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBR7Q8N806 425 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CEP112Q8N8E3 955 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC43A3Q8NBI5 491 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 MSANTD4Q8NCY6 345 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 BEST2Q8NFU1 509 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 HPDLQ96IR7 371 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 VCPIP1Q96JH7 1222 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPGRIP1Q96KN7 1286 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SNX27Q96L92 541 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 NSUN5Q96P11 429 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CITED4Q96RK1 184 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM129BQ96TA1 746 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PI4K2AQ9BTU6 479 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 BCO2Q9BYV7 579 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SENP6Q9GZR1 1112 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LACRTQ9GZZ8 138 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 XYLT2Q9H1B5 865 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PDCL3Q9H2J4 239 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBN1Q9NPG3 1134 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 ENAMQ9NRM1 1142 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SEPT11Q9NVA2 429 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC38A7Q9NVC3 462 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SNTG2Q9NY99 539 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CNTN3Q9P232 1028 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 LCMT1Q9UIC8 334 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CDC23Q9UJX2 597 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBQLN1Q9UMX0 589 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PTPN22Q9Y2R2 807 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOC2LQ9Y3T9 749 aaKnown RBP4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIM17Q9Y577 477 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms