RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHKAP35790 457 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 TRPC3Q13507 836 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 SLMAPQ14BN4 828 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 PRUNE1Q86TP1 453 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 RHOT1Q8IXI2 618 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 ANKRD36BP1Q96IX9 119 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 OSMRQ99650 979 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 GGT7Q9UJ14 662 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 CNTN6Q9UQ52 1028 aa14.65□□□□□ -0.06
PTCHD3-201ENST00000438700 A0A1B0GUA9 196 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 C5orf60A6NFR6 353 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 LACTBL1A8MY62 500 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 TREHO43280 583 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 ADAM17P78536 824 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PURAQ00577 322 aaKnown RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PRKCZQ05513 592 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 NOGQ13253 232 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 GKAP1Q5VSY0 366 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 MFSD14CQ5VZR4 134 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 KAZNQ674X7 775 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 HIBCHQ6NVY1 386 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 DNAJB3Q8WWF6 145 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PWWP2AQ96N64 755 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 MCEEQ96PE7 176 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 GCOM2Q9BZD3 368 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 CDC42EP4Q9H3Q1 356 aaKnown RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 AAASQ9NRG9 546 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 SCINQ9Y6U3 715 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 CITO14578 2027 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PSTPIP1O43586 416 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 GAS8O95995 478 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PAX7P23759 505 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 ZNF132P52740 706 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 ITGA8P53708 1063 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 CAP1Q01518 475 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 KLF1Q13351 362 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 CCDC38Q502W7 563 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 FEZF2Q8TBJ5 459 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 SLCO2A1Q92959 643 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 ACSF2Q96CM8 615 aaPredicted RBP14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 SNF8Q96H20 258 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 KATNAL1Q9BW62 490 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 OSBPL8Q9BZF1 889 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 PARVAQ9NVD7 372 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 BAIAP2L1Q9UHR4 511 aa14.64□□□□□ -0.07
PTCHD3-201ENST00000438700 KRT10P13645 584 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 MMP8P22894 467 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ADCY8P40145 1251 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ADCY2Q08462 1091 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 TRIM32Q13049 653 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 JADE1Q6IE81 842 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 CATSPER4Q7RTX7 472 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 VCPIP1Q96JH7 1222 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ADPGKQ9BRR6 497 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 NIF3L1Q9GZT8 377 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 WHRNQ9P202 907 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 SRRM3A6NNA2 597 aaPredicted RBP14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 SKAP2O75563 359 aaPredicted RBP14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 KRT19P08727 400 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ATF2P15336 505 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ATF7P17544 494 aaPredicted RBP14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 IVDP26440 423 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ELF3P78545 371 aaPredicted RBP14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 XRCC4Q13426 336 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 LONRF1Q17RB8 773 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 SLC10A6Q3KNW5 377 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 CYP4A22Q5TCH4 519 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 UBR7Q8N806 425 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 MAIP1Q8WWC4 291 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 TFAP2BQ92481 460 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 PGM2Q96G03 612 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 XYLT2Q9H1B5 865 aa14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 NXF1Q9UBU9 619 aaKnown RBP14.63□□□□□ -0.07
PTCHD3-201ENST00000438700 C17orf102A2RUQ5 167 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 F8VP50 259 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 PGK1P00558 417 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 CHN1P15882 459 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 HOXA11P31270 313 aaPredicted RBP14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 CDC42EP1Q00587 391 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 ZNF252P-AS1Q0IIN9 211 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 PTK6Q13882 451 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 GNASQ5JWF2 1037 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 KATNAL2Q8IYT4 538 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 C7orf31Q8N865 590 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 C1orf127Q8N9H9 656 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 ATL2Q8NHH9 583 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 GRK7Q8WTQ7 553 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 CAPNS2Q96L46 248 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 XPO6Q96QU8 1125 aaKnown RBP14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 SIX4Q9UIU6 781 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 L3MBTL1Q9Y468 752 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 TRIP11Q15643 1979 aa14.62□□□□□ -0.07
PTCHD3-201ENST00000438700 MGRN1O60291 552 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms