RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 ELF1P32519 619 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 TUFMP49411 452 aaKnown RBP19.53■□□□□ 0.72
HDAC6-208ENST00000438518 SLC8A3P57103 927 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 CYP27A1Q02318 531 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 CNGA2Q16280 664 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 ASIC2Q16515 512 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 LILRA6Q6PI73 481 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 CCDC149Q6ZUS6 474 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 LRRTM3Q86VH5 581 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 OR8K1Q8NGG5 319 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 SMARCD1Q96GM5 515 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 DNAJC7Q99615 494 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 HESX1Q9UBX0 185 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 FBXW11Q9UKB1 542 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 PCDHGC3Q9UN70 934 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 O00370 1275 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 TGM5O43548 720 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 CLASP2O75122 1294 aaKnown RBP19.52■□□□□ 0.72
HDAC6-208ENST00000438518 PLD1Q13393 1074 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 ORC1Q13415 861 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 LCLAT1Q6UWP7 414 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 RNF19BQ6ZMZ0 732 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 TCEAL8Q8IYN2 117 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 FUKQ8N0W3 1084 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 C12orf29Q8N999 325 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 SLC2A14Q8TDB8 520 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 EPS8L1Q8TE68 723 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 ZNF606Q8WXB4 792 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 ABHD10Q9NUJ1 306 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 ZNHIT6Q9NWK9 470 aaKnown RBP19.52■□□□□ 0.72
HDAC6-208ENST00000438518 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.52■□□□□ 0.72
HDAC6-208ENST00000438518 PCDHGC5Q9Y5F6 944 aa19.52■□□□□ 0.72
HDAC6-208ENST00000438518 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 TRIM66O15016 1216 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 THAP12O43422 761 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 CSPG5O95196 566 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 FAM200BP0CF97 657 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 PNMA6AP0CW24 399 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-208ENST00000438518 SETSIPP0DME0 302 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 BCAT1P54687 386 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 GSDMDP57764 484 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 ADCY1Q08828 1119 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 PPP1R26Q5T8A7 1209 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-208ENST00000438518 LIN9Q5TKA1 542 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 IRF2BP2Q7Z5L9 587 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 ADGRD2Q7Z7M1 963 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 FAM35AQ86V20 835 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 SLC47A2Q86VL8 602 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 GLYCTKQ8IVS8 523 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 ANKRD52Q8NB46 1076 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 SLC22A17Q8WUG5 538 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 CASP10Q92851 521 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 MED10Q9BTT4 135 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 B3GNT5Q9BYG0 378 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 CSNK1G1Q9HCP0 422 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 PNPLA8Q9NP80 782 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 FAM49BQ9NUQ9 324 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 TMLHEQ9NVH6 421 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-208ENST00000438518 TSPAN16Q9UKR8 245 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 CEP83Q9Y592 693 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 HCFC2Q9Y5Z7 792 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 PATJQ8NI35 1801 aa19.51■□□□□ 0.71
HDAC6-208ENST00000438518 SERPING1P05155 500 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 CCDC130P13994 396 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 HOXA9P31269 272 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 NRIP1P48552 1158 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 RPL10AP62906 217 aaKnown RBP19.5■□□□□ 0.71
HDAC6-208ENST00000438518 CDR2Q01850 454 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 PPP1R2P3Q6NXS1 205 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 TMEM184AQ6ZMB5 413 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 TRIM72Q6ZMU5 477 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 PALB2Q86YC2 1186 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 KREMEN2Q8NCW0 462 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 PGLYRP2Q96PD5 576 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 CYP4F11Q9HBI6 524 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 DMAP1Q9NPF5 467 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-208ENST00000438518 DZANK1Q9NVP4 752 aa19.5■□□□□ 0.71
HDAC6-208ENST00000438518 NOCTQ9UK39 431 aaKnown RBP19.5■□□□□ 0.71
HDAC6-208ENST00000438518 PRRG1O14668 218 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 POU2F2P09086 479 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 HAPLN1P10915 354 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-208ENST00000438518 NPR3P17342 541 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 BRD2P25440 801 aaKnown RBP19.49■□□□□ 0.71
HDAC6-208ENST00000438518 ANXA13P27216 316 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 KLHL30Q0D2K2 578 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 BST2Q10589 180 aaKnown RBP19.49■□□□□ 0.71
HDAC6-208ENST00000438518 KCNC3Q14003 757 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 ADGRE1Q14246 886 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 TCEAL5Q5H9L2 206 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 PAQR9Q6ZVX9 377 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 VPS36Q86VN1 386 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 DEFB123Q8N688 67 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 EFHBQ8N7U6 833 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 TC2NQ8N9U0 490 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 ATAD1Q8NBU5 361 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 TFAP2BQ92481 460 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 DDX1Q92499 740 aaKnown RBP19.49■□□□□ 0.71
HDAC6-208ENST00000438518 C8orf48Q96LL4 319 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms