RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CAPN9O14815 690 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 LARGE1O95461 756 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CDC25CP30307 473 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 EIF2S3P41091 472 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 RPL6Q02878 288 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ATF7IP2Q5U623 682 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SLC41A1Q8IVJ1 513 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TXNDC5Q8NBS9 432 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GCNAQ96QF7 691 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 C2orf40Q9H1Z8 148 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 DUS2Q9NX74 493 aaKnown RBP13.39□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MUC22E2RYF6 1773 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 M0QZQ0 153 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TLX3O43711 291 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SYPP08247 313 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CPA1P15085 419 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 KCNE1P15382 129 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 OPRD1P41143 372 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GRM5P41594 1212 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ZNF33AQ06730 810 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MTF1Q14872 753 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 STKLD1Q8NE28 680 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CDT1Q9H211 546 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 LINC00597Q9H2U6 94 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PRM3Q9NNZ6 103 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SH3GLB2Q9NR46 395 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TEX15Q9BXT5 2789 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CEP192Q8TEP8 1941 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 AP5Z1O43299 807 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 DKK1O94907 266 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 F11P03951 625 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 EML3Q32P44 896 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PLEKHG6Q3KR16 790 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 OSCP1Q8WVF1 389 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PRDM16Q9HAZ2 1276 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 IL21RQ9HBE5 538 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 COL6A6A6NMZ7 2263 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TCRBV21S2A2A0A5A6 115 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 OR6C75A6NL08 312 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 HSPA4P34932 840 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 NLRP12P59046 1061 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GAB4Q2WGN9 574 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MGAT5BQ3V5L5 792 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SEMA4CQ9C0C4 833 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 NCOA5Q9HCD5 579 aaKnown RBP13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 CNTN3Q9P232 1028 aa13.36□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 PLK4O00444 970 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ADAM23O75077 832 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 WISP1O95388 367 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 IFNAR1P17181 557 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 IFNAR2P48551 515 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 SPAG1Q07617 926 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GRIK2Q13002 908 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 BYSLQ13895 437 aaKnown RBP13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 VEPH1Q14D04 833 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 ZNF77Q15935 545 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TAF12Q16514 161 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 GPR155Q7Z3F1 870 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 RABEPKQ7Z6M1 372 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 USP37Q86T82 979 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 MON1AQ86VX9 555 aa13.35□□□□□ -0.27
SMAD9-IT1-201ENST00000437983 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms