RNA–Protein interactions for RNA: ENST00000437650.2

HLA-DRB6-203, Transcript of major histocompatibility complex, class II, DR beta 6 (pseudogene), humanhuman

BASIC

Gene HLA-DRB6, Length 715 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB6-203ENST00000437650 UBXN4Q92575 508 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 RABGGTAQ92696 567 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 MCRS1Q96EZ8 462 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 IP6K2Q9UHH9 426 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CYTH4Q9UIA0 394 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CDH9Q9ULB4 789 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PACSIN2Q9UNF0 486 aaPredicted RBP11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 COL4A4P53420 1690 aaPredicted RBP11.52□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ZNF185O15231 689 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CLTBP09497 229 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PTPN1P18031 435 aaKnown RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LMO2P25791 158 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PCSK1P29120 753 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 BST2Q10589 180 aaKnown RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PIGHQ14442 188 aaPredicted RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ACAP1Q15027 740 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TIGD5Q53EQ6 642 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CCDC181Q5TID7 509 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 WSCD1Q658N2 575 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TTC30AQ86WT1 665 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 METTL23Q86XA0 190 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 XYLT1Q86Y38 959 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 C12orf29Q8N999 325 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LRRN4CLQ8ND94 238 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 HSFY1Q96LI6 401 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CPXM1Q96SM3 734 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ACBD6Q9BR61 282 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 MRPL9Q9BYD2 267 aaKnown RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 GOLPH3Q9H4A6 298 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TBC1D13Q9NVG8 400 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 INPP5FQ9Y2H2 1132 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PCDHA3Q9Y5H8 950 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 COL4A6Q14031 1691 aa11.51□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 KCNK3O14649 394 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PSTPIP1O43586 416 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SPOPO43791 374 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 B3GAT3O94766 335 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 DDHD2O94830 711 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ERBB2P04626 1255 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CXCR5P32302 372 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ACADSBP45954 432 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PEX5P50542 639 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ARCQ7LC44 396 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 NECAB2Q7Z6G3 386 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 GPR161Q8N6U8 529 aaKnown RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 DIS3LQ8TF46 1054 aaKnown RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SCLYQ96I15 445 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CAPZA3Q96KX2 299 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CASD1Q96PB1 797 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 FAM193BQ96PV7 902 aaPredicted RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 NAP1L3Q99457 506 aaPredicted RBP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TMEM175Q9BSA9 504 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 UBXN6Q9BZV1 441 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LRFN2Q9ULH4 789 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CCDC188H7C350 402 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 KIAA0355O15063 1070 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TRAPPC3O43617 180 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TUBBP07437 444 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 KRT3P12035 628 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 CYP2C18P33260 490 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SLC8A3P57103 927 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PSMC1P62191 440 aaKnown RBP11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 RPL7AP62424 266 aaKnown RBP11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 PDE4CQ08493 712 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 IKBKEQ14164 716 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 TCTN1Q2MV58 587 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ERCC6LQ2NKX8 1250 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 C2CD6Q53TS8 623 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LRRC38Q5VT99 294 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 LLGL2Q6P1M3 1020 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 FAM171BQ6P995 826 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 DCUN1D2Q6PH85 259 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ZNF280BQ86YH2 543 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
HLA-DRB6-203ENST00000437650 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms