RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 LRP3O75074 770 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 PPP6R2O75170 966 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ATP2C2O75185 946 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 RETP07949 1114 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CSH1P0DML2 217 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CSH2P0DML3 217 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CHRM1P11229 460 aaPredicted RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 IDEP14735 1019 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TCF3P15923 654 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 LMO2P25791 158 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CNR2P34972 360 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TXLNAP40222 546 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 STAT6P42226 847 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 MAGEA11P43364 429 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 FNTBP49356 437 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 KPNA1P52294 538 aaPredicted RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 RBP5P82980 135 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ZXDBP98169 803 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TSPY1Q01534 308 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 USP4Q13107 963 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 SRSF5Q13243 272 aaKnown RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 RUNX3Q13761 415 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 PPP2R5DQ14738 602 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ZNF77Q15935 545 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 DDR2Q16832 855 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 LMBRD2Q68DH5 695 aaPredicted RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TRIM68Q6AZZ1 485 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 SHC4Q6S5L8 630 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 DPH6Q7L8W6 267 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 SDK1Q7Z5N4 2213 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 WDR5BQ86VZ2 330 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 LONP2Q86WA8 852 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CBWD2Q8IUF1 395 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CSGALNACT2Q8N6G5 542 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 PDILTQ8N807 584 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 MAB21L3Q8N8X9 362 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ZNF507Q8TCN5 953 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CACTINQ8WUQ7 758 aaKnown RBP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 BACH2Q9BYV9 841 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TNMDQ9H2S6 317 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 PCIF1Q9H4Z3 704 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TMEM206Q9H813 350 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 KIF9Q9HAQ2 790 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TDP1Q9NUW8 608 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 TMEM30AQ9NV96 361 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 SNX9Q9Y5X1 595 aa6.63□□□□□ -1.35
PNKDP1-201ENST00000435914 ACACBO00763 2458 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 ZNF233A6NK53 670 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 K7ELQ4 463 aaPredicted RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SPTLC2O15270 562 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 EIF3DO15371 548 aaKnown RBP eCLIP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 HUS1O60921 280 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 YEATS4O95619 227 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 STAU1O95793 577 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 OLFM2O95897 454 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CST3P01034 146 aaPredicted RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 ARSAP15289 507 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 WARSP23381 471 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 PCSK1P29120 753 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 GJA4P35212 333 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 AVPR1AP37288 418 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 LHX1P48742 406 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 USP46P62068 366 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 RPL10AP62906 217 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 ARHGAP8P85298 464 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 MYL7Q01449 175 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 LMNB2Q03252 620 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SPEM2Q0P670 501 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 BFSP1Q12934 665 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SIM2Q14190 667 aaPredicted RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 LPAL2Q16609 132 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 BMT2Q1RMZ1 405 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 GAB4Q2WGN9 574 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 EML3Q32P44 896 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 TRAPPC11Q7Z392 1133 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 WDR49Q8IV35 697 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CCDC65Q8IXS2 484 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 ADGRF2Q8IZF7 708 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SYCP3Q8IZU3 236 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SCFD1Q8WVM8 642 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 MRPS31Q92665 395 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 HPDLQ96IR7 371 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 SPATA17Q96L03 361 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CEP295NLQ96MC4 621 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 GCNAQ96QF7 691 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CYP2S1Q96SQ9 504 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 TTLL2Q9BWV7 592 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CUEDC2Q9H467 287 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 EBF3Q9H4W6 596 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 AGPAT3Q9NRZ7 376 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms