RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RENBPP51606 427 aa16.3■□□□□ 0.2
NEDD4-202ENST00000435532 ZNF284Q2VY69 593 aa16.3■□□□□ 0.2
NEDD4-202ENST00000435532 PABPC1LQ4VXU2 614 aaKnown RBP16.3■□□□□ 0.2
NEDD4-202ENST00000435532 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
NEDD4-202ENST00000435532 MTBPQ96DY7 904 aa16.3■□□□□ 0.2
NEDD4-202ENST00000435532 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
NEDD4-202ENST00000435532 APRTP07741 180 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 PPM1AP35813 382 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DGKZQ13574 1117 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 PPFIA2O75334 1257 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 UBA1P22314 1058 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 HS6ST3Q8IZP7 471 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 TPX2Q9ULW0 747 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 CDY2AQ9Y6F7 541 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 NR1D1P20393 614 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 FMR1Q06787 632 aaKnown RBP eCLIP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 SLFN11Q7Z7L1 901 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 RUBCNQ92622 972 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 CIPCQ9C0C6 399 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 MAF1Q9H063 256 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DDX47Q9H0S4 455 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 CFLARO15519 480 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 SPAG6O75602 509 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 PARNO95453 639 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 RHBDL3P58872 404 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 CYTH2Q99418 400 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 SLC9A3R1O14745 358 aaPredicted RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DCTN3O75935 186 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 ATXN3P54252 364 aaPredicted RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 STAT4Q14765 748 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 DDIASQ8IXT1 998 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 SPATA18Q8TC71 538 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 BHMTQ93088 406 aa16.29■□□□□ 0.2
NEDD4-202ENST00000435532 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 AAR2Q9Y312 384 aaKnown RBP16.29■□□□□ 0.2
NEDD4-202ENST00000435532 H2AFYO75367 372 aaKnown RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 YWHAQP27348 245 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 HIST2H2ACQ16777 129 aaPredicted RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 HIST2H2AA3Q6FI13 130 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 SNX31Q8N9S9 440 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 KIF2CQ99661 725 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 FRMD8Q9BZ67 464 aaPredicted RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 GIMAP4Q9NUV9 329 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 FAM95CA0A1B0GW59 222 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 HEATR9A2RTY3 570 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 POLBP06746 335 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 ESRRAP11474 423 aaPredicted RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 AKAP5P24588 427 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 MORF4L2Q15014 288 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 GJC2Q5T442 439 aaPredicted RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PRR23AA6NEV1 266 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 BYSLQ13895 437 aaKnown RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 CAMKK2Q96RR4 588 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 ASPSCR1Q9BZE9 553 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PPCSQ9HAB8 311 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 SELENONQ9NZV5 590 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PGK1P00558 417 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 FLT3LGP49771 235 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 RHOAP61586 193 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PLPPR4Q7Z2D5 763 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
NEDD4-202ENST00000435532 PYGBP11216 843 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 RARRES1P49788 294 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 TKTL1P51854 596 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 MAPRE2Q15555 327 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 ZDHHC17Q8IUH5 632 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 OTUB1Q96FW1 271 aaPredicted RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 CBWD1Q9BRT8 395 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 HDAC6Q9UBN7 1215 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 GTF3C4Q9UKN8 822 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 NUDCD3Q8IVD9 361 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 DMAP1Q9NPF5 467 aaPredicted RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 ZC3H7BQ9UGR2 993 aaKnown RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 MGEA5O60502 916 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 ITIH2P19823 946 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 SPATA17Q96L03 361 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.2
NEDD4-202ENST00000435532 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
NEDD4-202ENST00000435532 PLA2G6O60733 806 aa16.27■□□□□ 0.19
NEDD4-202ENST00000435532 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.19
NEDD4-202ENST00000435532 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms