RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 NOP14P78316 857 aaKnown RBP17.34■□□□□ 0.37
SMPD4-207ENST00000435455 CYP27A1Q02318 531 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 TEAD2Q15562 447 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 TTI2Q6NXR4 508 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 SUGP1Q8IWZ8 645 aaKnown RBP17.34■□□□□ 0.37
SMPD4-207ENST00000435455 FBXL6Q8N531 539 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 B3GALNT2Q8NCR0 500 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 FBXL13Q8NEE6 735 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 TAS1R2Q8TE23 839 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 SMARCD2Q92925 531 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 ELSPBP1Q96BH3 223 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 CEP295NLQ96MC4 621 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 ASB16Q96NS5 453 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
SMPD4-207ENST00000435455 KXD1Q9BQD3 176 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 ATXN3LQ9H3M9 355 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 CLSTN2Q9H4D0 955 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 SLC2A4RGQ9NR83 387 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-207ENST00000435455 CTNND2Q9UQB3 1225 aa17.34■□□□□ 0.37
SMPD4-207ENST00000435455 ZNF318Q5VUA4 2279 aa17.33■□□□□ 0.37
SMPD4-207ENST00000435455 ATP8B3O60423 1300 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 TRIM21P19474 475 aaKnown RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 BDNFP23560 247 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 RAP1GAPP47736 663 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 PAK1Q13153 545 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 DDR2Q16832 855 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 DCAF17Q5H9S7 520 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 FAM78AQ5JUQ0 283 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 SPOPLQ6IQ16 392 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 FRMD5Q7Z6J6 570 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 GPR152Q8TDT2 470 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 ELMO3Q96BJ8 720 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 PCED1BQ96HM7 432 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 FAXDC2Q96IV6 333 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 RPP25Q9BUL9 199 aaKnown RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 BCO2Q9BYV7 579 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 NIF3L1Q9GZT8 377 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 SDCBP2Q9H190 292 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 CYP3A43Q9HB55 503 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 TRPV4Q9HBA0 871 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 ZFP14Q9HCL3 533 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 WNT16Q9UBV4 365 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 ZMYM5Q9UJ78 669 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 NME7Q9Y5B8 376 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.36
SMPD4-207ENST00000435455 NUP210Q8TEM1 1887 aaPredicted RBP17.33■□□□□ 0.36
SMPD4-207ENST00000435455 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-207ENST00000435455 TRIM66O15016 1216 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 COL9A1P20849 921 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 FCARP24071 287 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 ANXA13P27216 316 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 ASPAP45381 313 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 GPR15P49685 360 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 CCDC40Q4G0X9 1142 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 TANGO2Q6ICL3 276 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 POTEHQ6S545 545 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 UNC93AQ86WB7 457 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 ZSCAN18Q8TBC5 510 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-207ENST00000435455 E2F7Q96AV8 911 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 TRMT2BQ96GJ1 504 aaKnown RBP17.32■□□□□ 0.36
SMPD4-207ENST00000435455 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 ZSWIM3Q96MP5 696 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 ELOVL4Q9GZR5 314 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 DNAI2Q9GZS0 605 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 DPEP3Q9H4B8 488 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 IL21Q9HBE4 155 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 LMBRD1Q9NUN5 540 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 RAB20Q9NX57 234 aa17.32■□□□□ 0.36
SMPD4-207ENST00000435455 OBSL1O75147 1896 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 SLC38A8A6NNN8 435 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 NOL4O94818 638 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
SMPD4-207ENST00000435455 CFHP08603 1231 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 GRIK1P39086 918 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 NLRP12P59046 1061 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 PFKPQ01813 784 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 INCA1Q0VD86 236 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 WDR44Q5JSH3 913 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 SLC35C1Q96A29 364 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 APOBEC3GQ9HC16 384 aaKnown RBP17.31■□□□□ 0.36
SMPD4-207ENST00000435455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.31■□□□□ 0.361e-14■■■■■ 157
SMPD4-207ENST00000435455 MAGED2Q9UNF1 606 aaPredicted RBP17.31■□□□□ 0.36
SMPD4-207ENST00000435455 COQ4Q9Y3A0 265 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 HCN4Q9Y3Q4 1203 aa17.31■□□□□ 0.36
SMPD4-207ENST00000435455 ZNF638Q14966 1978 aaKnown RBP17.31■□□□□ 0.36
SMPD4-207ENST00000435455 MYH10P35580 1976 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 GNA14O95837 355 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 F11P03951 625 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 DDX6P26196 483 aaKnown RBP eCLIP17.3■□□□□ 0.362e-8■■■■■ 34.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms