RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 NME3Q13232 169 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 IQSEC1Q6DN90 963 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 TXNRD3NBQ6F5E7 133 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 PHF13Q86YI8 300 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 HACE1Q8IYU2 909 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 FAM71DQ8N9W8 422 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 CCNYQ8ND76 341 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 EXD1Q8NHP7 514 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 LPIN3Q9BQK8 851 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 TRAIPQ9BWF2 469 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ELOVL4Q9GZR5 314 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 TUBGCP4Q9UGJ1 667 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 TREHO43280 583 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 PIAS1O75925 651 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 RBP3P10745 1247 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 VDRP11473 427 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ATP5DP30049 168 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF354CQ86Y25 554 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 DDX56Q9NY93 547 aaKnown RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
CLDN4-203ENST00000435050 PPME1Q9Y570 386 aa12.79□□□□□ -0.36
CLDN4-203ENST00000435050 B4GALT4O60513 344 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 LSM8O95777 96 aaKnown RBP12.78□□□□□ -0.36
CLDN4-203ENST00000435050 ZBED1O96006 694 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 GNAT1P11488 350 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
CLDN4-203ENST00000435050 TAP1Q03518 808 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 TAPT1Q6NXT6 567 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 LRIG3Q6UXM1 1119 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 C15orf39Q6ZRI6 1047 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 PSD3Q9NYI0 1048 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 C17orf102A2RUQ5 167 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 A6NNZ2 444 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 TSPAN1O60635 241 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 ATP2A2P16615 1042 aaKnown RBP12.78□□□□□ -0.36
CLDN4-203ENST00000435050 GPD1P21695 349 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 EIF4BP23588 611 aaKnown RBP12.78□□□□□ -0.36
CLDN4-203ENST00000435050 CHKAP35790 457 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 GNL1P36915 607 aaPredicted RBP12.78□□□□□ -0.36
CLDN4-203ENST00000435050 BCAR1P56945 870 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 TUBB8Q3ZCM7 444 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 TFDP3Q5H9I0 405 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 LDLRAD1Q5T700 205 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 APPL2Q8NEU8 664 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 HASPINQ8TF76 798 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 VCPIP1Q96JH7 1222 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 DCDC2CA8MYV0 355 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 CREB3O43889 395 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 RPS6KA5O75582 802 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 CCDC130P13994 396 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 PSEN2P49810 448 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF792Q3KQV3 632 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 C3orf20Q8ND61 904 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 FGD4Q96M96 766 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 ZFYVE28Q9HCC9 887 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
CLDN4-203ENST00000435050 WDR91A4D1P6 747 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 SPAG7O75391 227 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CHN1P15882 459 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CPT1AP50416 773 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CROCCP2Q86T23 111 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 FAF2Q96CS3 445 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 IQCGQ9H095 443 aaKnown RBP12.77□□□□□ -0.36
CLDN4-203ENST00000435050 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.36
CLDN4-203ENST00000435050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CACNG4Q9UBN1 327 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 TMEM191CA6NGB0 347 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 PPEF2O14830 753 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 FSCN2O14926 492 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 MIPP30301 263 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 ASPAP45381 313 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 RAD23BP54727 409 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CENPUQ71F23 418 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 NLRP14Q86W24 1093 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 CFAP36Q96G28 342 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.36
CLDN4-203ENST00000435050 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.36
CLDN4-203ENST00000435050 ZNF518BQ9C0D4 1074 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 USP18Q9UMW8 372 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 NENFQ9UMX5 172 aa12.77□□□□□ -0.36
CLDN4-203ENST00000435050 PHIPQ8WWQ0 1821 aa12.77□□□□□ -0.37
CLDN4-203ENST00000435050 ERBB2P04626 1255 aa12.77□□□□□ -0.37
CLDN4-203ENST00000435050 BRAFP15056 766 aa12.77□□□□□ -0.37
CLDN4-203ENST00000435050 RGS2P41220 211 aa12.77□□□□□ -0.37
CLDN4-203ENST00000435050 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms