RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CLCN1P35523 988 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 MRE11P49959 708 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 CLCN4P51793 760 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 ZNF132P52740 706 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 PTK2Q05397 1052 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 HYAL1Q12794 435 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 DUSP4Q13115 394 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 TRIM14Q14142 442 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 FIGNQ5HY92 759 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-205ENST00000433439 TPGS2Q68CL5 300 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 SCN4BQ8IWT1 228 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-205ENST00000433439 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 AFF4Q9UHB7 1163 aaKnown RBP16.3■□□□□ 0.2
CNOT9-205ENST00000433439 CNTN6Q9UQ52 1028 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
CNOT9-205ENST00000433439 HCFC2Q9Y5Z7 792 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 PLXNA3P51805 1871 aa16.3■□□□□ 0.2
CNOT9-205ENST00000433439 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 LINC01565O15544 149 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 SOAT2O75908 522 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 ABLIM3O94929 683 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 SEC24AO95486 1093 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 VNN2O95498 520 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 ATF2P15336 505 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 CYP2F1P24903 491 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 KRT9P35527 623 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 ASIC2Q16515 512 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 GOLGA7BQ2TAP0 167 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 SPPL2BQ8TCT7 592 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 SLC22A17Q8WUG5 538 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 IQCDQ96DY2 449 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 PDCL3Q9H2J4 239 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 CRISPLD1Q9H336 500 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 MAN1C1Q9NR34 630 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 KRT82Q9NSB4 513 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
CNOT9-205ENST00000433439 A0A1W2PQJ5 194 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 FAM170AA1A519 330 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 AP1G2O75843 785 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 FERP16591 822 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 COL9A1P20849 921 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 GRIK1P39086 918 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 GPR15P49685 360 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 PDE6CP51160 858 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 ADKP55263 362 aaKnown RBP16.28■□□□□ 0.2
CNOT9-205ENST00000433439 BPIFB4P59827 614 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 ZBED6P86452 979 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 SKIV2LQ15477 1246 aaKnown RBP16.28■□□□□ 0.2
CNOT9-205ENST00000433439 SDHAF4Q5VUM1 108 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 LILRA6Q6PI73 481 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 FUKQ8N0W3 1084 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 SLC7A14Q8TBB6 771 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 UBA3Q8TBC4 463 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 CDCA3Q99618 268 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-205ENST00000433439 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 FBXW11Q9UKB1 542 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 KIAA1257Q9ULG3 409 aa16.28■□□□□ 0.2
CNOT9-205ENST00000433439 PRRC2BQ5JSZ5 2229 aaKnown RBP16.28■□□□□ 0.2
CNOT9-205ENST00000433439 CHD9Q3L8U1 2897 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 M0QYV0 167 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 MED7O43513 233 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 C8AP07357 584 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 CYP11B1P15538 503 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 POU3F3P20264 500 aaPredicted RBP16.27■□□□□ 0.2
CNOT9-205ENST00000433439 PPM1LQ5SGD2 360 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 PAQR9Q6ZVX9 377 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 STKLD1Q8NE28 680 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 GIPC2Q8TF65 315 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
CNOT9-205ENST00000433439 ZNF606Q8WXB4 792 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 ANP32BQ92688 251 aaKnown RBP16.27■□□□□ 0.2
CNOT9-205ENST00000433439 SMARCD1Q96GM5 515 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 HNRNPABQ99729 332 aaKnown RBP16.27■□□□□ 0.2
CNOT9-205ENST00000433439 ZSWIM1Q9BR11 485 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 APOL5Q9BWW9 433 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 SEPT11Q9NVA2 429 aaKnown RBP16.27■□□□□ 0.2
CNOT9-205ENST00000433439 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 MYO6Q9UM54 1294 aa16.27■□□□□ 0.2
CNOT9-205ENST00000433439 AKR1B15C9JRZ8 316 aaPredicted RBP16.26■□□□□ 0.19
CNOT9-205ENST00000433439 O00370 1275 aa16.26■□□□□ 0.19
CNOT9-205ENST00000433439 MFAP3LO75121 409 aa16.26■□□□□ 0.19
CNOT9-205ENST00000433439 MICAL2O94851 1124 aa16.26■□□□□ 0.19
CNOT9-205ENST00000433439 LRG1P02750 347 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms