RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MAGED2Q9UNF1 606 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 CDYLQ9Y232 598 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 TBC1D30Q9Y2I9 924 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 NEU2Q9Y3R4 380 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 FER1L4A9Z1Z3 1794 aa3.75□□□□□ -1.81
HMGB1P27-201ENST00000431429 NPEPPSL1A6NEC2 478 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 AQP7P3A6NL99 342 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 GOLGA6L6A8MZA4 724 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 AHRRA9YTQ3 701 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 H7C4K7 107 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 MYO1CO00159 1063 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 PCDH17O14917 1159 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 RASSF9O75901 435 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 FAM155BO75949 473 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 GLP2RO95838 553 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ITGB3P05106 788 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CFIP05156 583 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CSF1RP07333 972 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SRGNP10124 158 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ARP10275 920 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 NPPBP16860 134 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 COMTP21964 271 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 PPIFP30405 207 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 LRPAP1P30533 357 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 APOBEC3AP31941 199 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 GCLCP48506 637 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ITGA8P53708 1063 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ARL4CP56559 192 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 LILRA4P59901 499 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 MC2RQ01718 297 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF844Q08AG5 666 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 MYO1EQ12965 1108 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 POSTNQ15063 836 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 INSCQ1MX18 579 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 PDCD4Q53EL6 469 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 MANEALQ5VSG8 457 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CRTC1Q6UUV9 634 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CYP26C1Q6V0L0 522 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 LIMS2Q7Z4I7 341 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 KCTD20Q7Z5Y7 419 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CCDC28AQ8IWP9 274 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SUGP1Q8IWZ8 645 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ATG16L2Q8NAA4 619 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 OR1N1Q8NGS0 311 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 OTUD7AQ8TE49 926 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 RAPGEF4Q8WZA2 1011 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZDHHC12Q96GR4 267 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 TEPSINQ96N21 525 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SCLT1Q96NL6 688 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 DCLRE1CQ96SD1 692 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 DDX23Q9BUQ8 820 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SMOC2Q9H3U7 446 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 TBC1D23Q9NUY8 699 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 KCNE5Q9UJ90 142 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 GTF2A1LQ9UNN4 478 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SCAF8Q9UPN6 1271 aaKnown RBP3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 SHOC2Q9UQ13 582 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 CEP83Q9Y592 693 aa3.74□□□□□ -1.81
HMGB1P27-201ENST00000431429 PRAMEF33A0A0G2JMD5 474 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 A0A1B0GVC2 190 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 CAPN14A8MX76 684 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 IPO5O00410 1097 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 CD3EAPO15446 510 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 PRAMEF10O60809 474 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 VPS4BO75351 444 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 NTSR2O95665 410 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 PTDSS1P48651 473 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 MAN2A2P49641 1150 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TIAL1Q01085 375 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 DYRK1AQ13627 763 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 EFR3AQ14156 821 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 HLXQ14774 488 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIM60Q495X7 471 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ARHGAP15Q53QZ3 475 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ALFQ53S48 1182 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TSHZ3Q63HK5 1081 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 MRNIPQ6NTE8 343 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 RFX8Q6ZV50 586 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF354CQ86Y25 554 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 GALNT15Q8N3T1 639 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 NSUN7Q8NE18 718 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPPL3Q8TCT6 385 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 BPIFB1Q8TDL5 484 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 RSC1A1Q92681 617 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 NACC2Q96BF6 587 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 OSBPL9Q96SU4 736 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZSWIM1Q9BR11 485 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 PTDSS2Q9BVG9 487 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 SORBS1Q9BX66 1292 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TEX101Q9BY14 249 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TTYH3Q9C0H2 523 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 REXO4Q9GZR2 422 aaKnown RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 PCDHAC1Q9H158 963 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 TP63Q9H3D4 680 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 CXorf36Q9H7Y0 433 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZBTB26Q9HCK0 441 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms