RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LPAL2Q16609 132 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 TMEM196Q5HYL7 178 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 TXNDC8Q6A555 127 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 CC2D1AQ6P1N0 951 aaPredicted RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 WDR5BQ86VZ2 330 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
MSH5-208ENST00000429846 CEP295NLQ96MC4 621 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 PCIF1Q9H4Z3 704 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 KIAA1586Q9HCI6 787 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 PARD6AQ9NPB6 346 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 HPS4Q9NQG7 708 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 SIX4Q9UIU6 781 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 CCL26Q9Y258 94 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 SPAG17Q6Q759 2223 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 PTPRDP23468 1912 aa15.98■□□□□ 0.15
MSH5-208ENST00000429846 CCDC163A0A0D9SF12 145 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 ZNF233A6NK53 670 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 TRDMT1O14717 391 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 EIF3DO15371 548 aaKnown RBP eCLIP15.97■□□□□ 0.15
MSH5-208ENST00000429846 HRO43593 1189 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 STX6O43752 255 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 ATG13O75143 517 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 TADA3O75528 432 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 PRPF6O94906 941 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 TNNC2P02585 160 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 ACAT1P24752 427 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 CYP2F1P24903 491 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 MAGEA11P43364 429 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 GPR15P49685 360 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 ATXN1P54253 815 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 AMPD3Q01432 767 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 FAM160A1Q05DH4 1040 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 DMWDQ09019 674 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 SPEM2Q0P670 501 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 STK38Q15208 465 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 MAPRE1Q15691 268 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 DDR2Q16832 855 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 SOWAHAQ2M3V2 549 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 C4orf50Q6ZRC1 276 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 PDILTQ8N807 584 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 FSIP1Q8NA03 581 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 LINC00301Q8NCQ3 95 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 NETO1Q8TDF5 533 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 NOC3LQ8WTT2 800 aaKnown RBP15.97■□□□□ 0.15
MSH5-208ENST00000429846 PANK2Q9BZ23 570 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 EBF3Q9H4W6 596 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 INTS13Q9NVM9 706 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 GTF3C4Q9UKN8 822 aa15.97■□□□□ 0.15
MSH5-208ENST00000429846 USP17L7P0C7H9 530 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 PDE6CP51160 858 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 DUOXA2Q1HG44 320 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 FBXO43Q4G163 708 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 SDHAF4Q5VUM1 108 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 FAM171BQ6P995 826 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 LIMS2Q7Z4I7 341 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 OSTM1Q86WC4 334 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 WDR49Q8IV35 697 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 TRIM9Q9C026 710 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 SEMA4GQ9NTN9 838 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 KBTBD4Q9NVX7 518 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 CDH9Q9ULB4 789 aa15.96■□□□□ 0.15
MSH5-208ENST00000429846 TRAV19A0A0A6YYK7 116 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 K7ELQ4 463 aaPredicted RBP15.95■□□□□ 0.14
MSH5-208ENST00000429846 SPTLC2O15270 562 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 PPP6R2O75170 966 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 TCF3P15923 654 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 DRD1P21728 446 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 USP4Q13107 963 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 MTF1Q14872 753 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 ZNF77Q15935 545 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 E2F4Q16254 413 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 CSRP2Q16527 193 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 HEATR6Q6AI08 1181 aaKnown RBP15.95■□□□□ 0.14
MSH5-208ENST00000429846 TRIM68Q6AZZ1 485 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 FSTL4Q6MZW2 842 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 CNNM4Q6P4Q7 775 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 VSTM1Q6UX27 236 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 CEP68Q76N32 757 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 CPA6Q8N4T0 437 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 STKLD1Q8NE28 680 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 OSCP1Q8WVF1 389 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 ATP2A3Q93084 1043 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 HPDLQ96IR7 371 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 ZNF396Q96N95 335 aaPredicted RBP15.95■□□□□ 0.14
MSH5-208ENST00000429846 SYT15Q9BQS2 421 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 MAGEF1Q9HAY2 307 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 C2orf42Q9NWW7 574 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 HSPBP1Q9NZL4 362 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 KIAA1549LQ6ZVL6 1849 aa15.95■□□□□ 0.14
MSH5-208ENST00000429846 UBE4BO95155 1302 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 PTPRJQ12913 1337 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 OTOL1A6NHN0 477 aaPredicted RBP15.94■□□□□ 0.14
MSH5-208ENST00000429846 YEATS4O95619 227 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 CKMP06732 381 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 PFKLP17858 780 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 SNRPFP62306 86 aaKnown RBP15.94■□□□□ 0.14
MSH5-208ENST00000429846 SRSF5Q13243 272 aaKnown RBP15.94■□□□□ 0.14
MSH5-208ENST00000429846 KCNB1Q14721 858 aa15.94■□□□□ 0.14
MSH5-208ENST00000429846 LMBRD2Q68DH5 695 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms