RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 O00370 1275 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 CCP110O43303 1012 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 NCK2O43639 380 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLU7O95391 586 aaKnown RBP10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 SKIP12755 728 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 RRM1P23921 792 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 ATICP31939 592 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 IRS1P35568 1242 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 MAGEA1P43355 309 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 MAP3K7CLP57077 242 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 INCA1Q0VD86 236 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 KIAA1328Q86T90 577 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 LRRC43Q8N309 656 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 EMC1Q8N766 993 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 RIN2Q8WYP3 895 aaPredicted RBP10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 SECISBP2LQ93073 1101 aaKnown RBP10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF560Q96MR9 790 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 ELAC1Q9H777 363 aaKnown RBP10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 GDAP2Q9NXN4 497 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 NUDT5Q9UKK9 219 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 PRDM4Q9UKN5 801 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 CDY1Q9Y6F8 540 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 LAMA1P25391 3075 aa10.1□□□□□ -0.79
HMGCLL1-206ENST00000428842 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 XPOTO43592 962 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 PTPN1P18031 435 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 PRKCIP41743 596 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 ERVFC1P60507 584 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 RPL7AP62424 266 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 PDE4CQ08493 712 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 DMTNQ08495 405 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 DDR2Q16832 855 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 PTPN20Q4JDL3 420 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 RBM23Q86U06 439 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 NT5DC4Q86YG4 428 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 SCAMP5Q8TAC9 235 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 IGSF21Q96ID5 467 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 VRTNQ9H8Y1 702 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 UBN1Q9NPG3 1134 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 EPOPA6NHQ4 379 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 HIDE1A8MVS5 230 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 PER2O15055 1255 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 VNN2O95498 520 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 ERBB2P04626 1255 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 LCP1P13796 627 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 TCF4P15884 667 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 AARSP49588 968 aaKnown RBP eCLIP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 SH3PXD2AQ5TCZ1 1133 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 FAM161BQ96MY7 647 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 SYT15Q9BQS2 421 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 MED10Q9BTT4 135 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 CDH22Q9UJ99 828 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 CNTN6Q9UQ52 1028 aa10.09□□□□□ -0.79
HMGCLL1-206ENST00000428842 LINC01553A4QN01 128 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 E5RJQ4 531 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 GABRDO14764 452 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 UNGP13051 313 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 TFE3P19532 575 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 OR1D2P34982 312 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 RFC2P35250 354 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 NOMO3P69849 1222 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 VPS52Q8N1B4 723 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 COLGALT1Q8NBJ5 622 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZMIZ2Q8NF64 920 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 MYLPFQ96A32 169 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SUSD3Q96L08 255 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 MAGEB5Q9BZ81 275 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 KRT82Q9NSB4 513 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 EIF3CLB5ME19 914 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 M0QZQ0 153 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 INPPL1O15357 1258 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 FGF18O76093 207 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 FTCDO95954 541 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 CCDC175P0C221 793 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 ODC1P11926 461 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 CXCR5P32302 372 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 RPL9P32969 192 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 GPD2P43304 727 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 NUMBP49757 651 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 PITX1P78337 314 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SPA17Q15506 151 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 CLEC16AQ2KHT3 1053 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 CTXN3Q4LDR2 81 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms