RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CYP3A5P20815 502 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 GPD2P43304 727 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 GABRB2P47870 512 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 MAGOHP61326 146 aaKnown RBP14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 SLC25A11Q02978 314 aaKnown RBP14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 CAV1Q03135 178 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 IRF5Q13568 498 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 HIC1Q14526 733 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 RHBDF2Q6PJF5 856 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 POLNQ7Z5Q5 900 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 CCDC89Q8N998 374 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 IPO4Q8TEX9 1081 aaKnown RBP14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 DNAJB3Q8WWF6 145 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 PKNOX2Q96KN3 472 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 NT5C1AQ9BXI3 368 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 TRIM6Q9C030 488 aaPredicted RBP14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 RABEP2Q9H5N1 569 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 FAM124BQ9H5Z6 455 aaPredicted RBP14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 ANAPC5Q9UJX4 755 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 SCN1AP35498 2009 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 TRPM7Q96QT4 1865 aa14.75□□□□□ -0.05
APOBEC3D-202ENST00000427494 PPEF2O14830 753 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CAND2O75155 1236 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 LRCH4O75427 683 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CYP2B6P20813 491 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CHKAP35790 457 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 MDH1P40925 334 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CDKN2BP42772 138 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CPT1AP50416 773 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF157P51786 506 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 LMNB2Q03252 620 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 HADHQ16836 314 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 ARFGAP1Q8N6T3 406 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 BEST2Q8NFU1 509 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 C18orf25Q96B23 403 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 NXF3Q9H4D5 531 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 AAASQ9NRG9 546 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 TSPAN16Q9UKR8 245 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 DNPEPQ9ULA0 475 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 KIAA1257Q9ULG3 409 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 SNX9Q9Y5X1 595 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 PDCD11Q14690 1871 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 MANSC4A6NHS7 340 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 SMIM23A6NLE4 172 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 KRT7P08729 469 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 PPP2R2AP63151 447 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 BEX3Q00994 111 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 BYSLQ13895 437 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 PCBP1Q15365 356 aaKnown RBP eCLIP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 GOLGA7BQ2TAP0 167 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 GLRA4Q5JXX5 417 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 IZUMO3Q5VZ72 239 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 LCLAT1Q6UWP7 414 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 TRMT10CQ7L0Y3 403 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 PRUNE1Q86TP1 453 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 BBOF1Q8ND07 529 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 BCAS4Q8TDM0 211 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 HAUS1Q96CS2 278 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 MCRS1Q96EZ8 462 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 APOL6Q9BWW8 343 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 AP5M1Q9H0R1 490 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 CDC42EP4Q9H3Q1 356 aaKnown RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF148Q9UQR1 794 aa14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 TRIP12Q14669 1992 aaPredicted RBP14.74□□□□□ -0.05
APOBEC3D-202ENST00000427494 TLDC2A0PJX2 215 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 C3orf70A6NLC5 250 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 PIK3R2O00459 728 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 TREHO43280 583 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 RECQL4O94761 1208 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 KLRC2P26717 231 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 IL1R2P27930 398 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 AXLP30530 894 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 LSP1P33241 339 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZNF200P98182 395 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 USP6NLQ92738 828 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 TSPYL1Q9H0U9 437 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 RNF19AQ9NV58 838 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 PIN4Q9Y237 131 aaKnown RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 HAS3O00219 553 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 AKAP5P24588 427 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 RGS2P41220 211 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 ADAM17P78536 824 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 PPARDQ03181 441 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 SNX17Q15036 470 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 STILQ15468 1287 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 ZBTB6Q15916 424 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 KCNT1Q5JUK3 1230 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 OR6B2Q6IFH4 312 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 DRICH1Q6PGQ1 229 aaPredicted RBP14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 ACOT1Q86TX2 421 aa14.73□□□□□ -0.05
APOBEC3D-202ENST00000427494 PGM2Q96G03 612 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms