RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 SKILP12757 684 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 UNGP13051 313 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 CHRNB2P17787 502 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PBX2P40425 430 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 RPL34P49207 117 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 KIF11P52732 1056 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 KRT83P78385 493 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 CENPCQ03188 943 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 BST2Q10589 180 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PCED1BQ96HM7 432 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 HSFY1Q96LI6 401 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 NOX5Q96PH1 765 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 ISCUQ9H1K1 167 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 NKX2-4Q9H2Z4 354 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 DPEP3Q9H4B8 488 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 NAGPAQ9UK23 515 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 RANBP2P49792 3224 aaKnown RBP12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PLXNA4Q9HCM2 1894 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 PTPRDP23468 1912 aa12.78□□□□□ -0.36
HDLBP-215ENST00000427487 DDX3XO00571 662 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 MICAL2O94851 1124 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ARHGEF15O94989 841 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 NDUFA10O95299 355 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ADH1AP07327 375 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 MMEP08473 750 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ATF2P15336 505 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 NPR3P17342 541 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 GPD2P43304 727 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ROR1Q01973 937 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 GPM6BQ13491 265 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 SPA17Q15506 151 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 CLEC16AQ2KHT3 1053 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 MDH1BQ5I0G3 518 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ALKBH5Q6P6C2 394 aaKnown RBP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 PAQR9Q6ZVX9 377 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 LRRTM3Q86VH5 581 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 PHF13Q86YI8 300 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-215ENST00000427487 C12orf29Q8N999 325 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 SLC35F5Q8WV83 523 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 MYLPFQ96A32 169 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 TRIM11Q96F44 468 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 B3GNT5Q9BYG0 378 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 ACP6Q9NPH0 428 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 LMCD1Q9NZU5 365 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 DPP7Q9UHL4 492 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 GTF3C4Q9UKN8 822 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
HDLBP-215ENST00000427487 A0A087X0T9 212 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 TRIM66O15016 1216 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 LPXNO60711 386 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ATP2C2O75185 946 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 RTN2O75298 545 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 CXCL14O95715 111 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 FAM228BP0C875 321 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 FAM200BP0CF97 657 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 MYBL1P10243 752 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ACADSBP45954 432 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 PSMC1P62191 440 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 NOMO3P69849 1222 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 CAMK1Q14012 370 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 PTPROQ16827 1216 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 SLC39A12Q504Y0 691 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ACAD10Q6JQN1 1059 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 FAM35AQ86V20 835 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ZDHHC17Q8IUH5 632 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 SPATA2LQ8IUW3 424 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 SCML4Q8N228 414 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms