RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-202ENST00000425436 SYN3O14994 580 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 POU3F3P20264 500 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-202ENST00000425436 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
SHOX2-202ENST00000425436 ELF2Q15723 593 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 SGSM1Q2NKQ1 1148 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 ZNF699Q32M78 642 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 WSCD1Q658N2 575 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 RSPO2Q6UXX9 243 aaPredicted RBP16.62■□□□□ 0.25
SHOX2-202ENST00000425436 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 NT5C1BQ96P26 610 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 IGFLR1Q9H665 355 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 RAB20Q9NX57 234 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 LMCD1Q9NZU5 365 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
SHOX2-202ENST00000425436 HUS1O60921 280 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 CNPP09543 421 aaKnown RBP16.61■□□□□ 0.25
SHOX2-202ENST00000425436 ODC1P11926 461 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 TNFAIP3P21580 790 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 ATICP31939 592 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 PSMD5Q16401 504 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 SOWAHAQ2M3V2 549 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 TCEAL5Q5H9L2 206 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 PDE12Q6L8Q7 609 aaKnown RBP16.61■□□□□ 0.25
SHOX2-202ENST00000425436 GJB7Q6PEY0 223 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 TLE6Q9H808 572 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 NENFQ9UMX5 172 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 L1RE1Q9UN81 338 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 TFR2Q9UP52 801 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 PRUNE2Q8WUY3 3088 aa16.61■□□□□ 0.25
SHOX2-202ENST00000425436 ADAM12O43184 909 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 RRP9O43818 475 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 MOCS3O95396 460 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ATP1A1P05023 1023 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 PAX3P23760 479 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 NRIP1P48552 1158 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 TNNC1P63316 161 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 MRPL58Q14197 206 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ZNF667Q5HYK9 610 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 TATDN2Q93075 761 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 KLHL5Q96PQ7 755 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 CLSTN3Q9BQT9 956 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 NSUN3Q9H649 340 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 APOBEC3GQ9HC16 384 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 SNX12Q9UMY4 172 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 IRAK3Q9Y616 596 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 FOXN3O00409 490 aaPredicted RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 TEX28O15482 410 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 STAU1O95793 577 aaKnown RBP16.6■□□□□ 0.25
SHOX2-202ENST00000425436 TYMPP19971 482 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 RAP1GAPP47736 663 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 CDR1P51861 262 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 CDH8P55286 799 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ARPP19P56211 112 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 GCNT1Q02742 428 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ARHGAP44Q17R89 818 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 CTXN3Q4LDR2 81 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 WDR44Q5JSH3 913 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 OVOS1Q6IE37 1185 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 ANKS3Q6ZW76 656 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 PALB2Q86YC2 1186 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 RXFP1Q9HBX9 757 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 HYOU1Q9Y4L1 999 aa16.6■□□□□ 0.25
SHOX2-202ENST00000425436 COL6A3P12111 3177 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 TSC2P49815 1807 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 HCRTO43612 131 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
SHOX2-202ENST00000425436 OAZ2O95190 189 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 CYP11A1P05108 521 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 KLRC2P26717 231 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 OR1D2P34982 312 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
SHOX2-202ENST00000425436 HYAL1Q12794 435 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
SHOX2-202ENST00000425436 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 TOP6BLQ8N6T0 577 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 TAF4BQ92750 862 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 AGPAT1Q99943 283 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 MRPL45Q9BRJ2 306 aaKnown RBP16.59■□□□□ 0.25
SHOX2-202ENST00000425436 SYT11Q9BT88 431 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 EMILIN2Q9BXX0 1053 aa16.59■□□□□ 0.25
SHOX2-202ENST00000425436 IMPG2Q9BZV3 1241 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms