RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 C1orf228Q6PIY5 440 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 CDHR3Q6ZTQ4 885 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 ACAD11Q709F0 780 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 GINM1Q9NU53 330 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 PAIP2BQ9ULR5 123 aaKnown RBP11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 SMG5Q9UPR3 1016 aaKnown RBP11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 SH3GLB1Q9Y371 365 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 TCEA3O75764 348 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 UQCRBP14927 111 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 PMLP29590 882 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 AQP5P55064 265 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 CES4AQ5XG92 561 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 GAB3Q8WWW8 586 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 DGCR14Q96DF8 476 aaKnown RBP11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 SERAC1Q96JX3 654 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 CATSPER2Q96P56 530 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 PAFAH2Q99487 392 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 A0A1B0GUL6 1792 aa11.83□□□□□ -0.52
SEC61A1-202ENST00000424880 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 SORBS3O60504 671 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 STAMBPO95630 424 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 TMEM259Q4ZIN3 620 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 SLC44A4Q53GD3 710 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 ODR4Q5SWX8 454 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 KLC3Q6P597 504 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 DENND5BQ6ZUT9 1274 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 DHDDSQ86SQ9 333 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 HPS6Q86YV9 775 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CCDC89Q8N998 374 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 GRIN3AQ8TCU5 1115 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RSPH1Q8WYR4 309 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CBWD1Q9BRT8 395 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 MRPL1Q9BYD6 325 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 NYXQ9GZU5 481 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 ARMC7Q9H6L4 198 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 AGPAT3Q9NRZ7 376 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 HEY1Q9Y5J3 304 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 PIK3R2O00459 728 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 EMP3P54852 163 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 BFSP1Q12934 665 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CYTH1Q15438 398 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 ANKRD22Q5VYY1 191 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RINT1Q6NUQ1 792 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 B3GNT6Q6ZMB0 384 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 TMIGD2Q96BF3 282 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 KREMEN1Q96MU8 473 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 PKD2L1Q9P0L9 805 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 PSMC3IPQ9P2W1 217 aaPredicted RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 ADCY3O60266 1144 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 TM7SF2O76062 418 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CFHP08603 1231 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 PDGFRBP09619 1106 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 COL6A2P12110 1019 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CD1EP15812 388 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RAG1P15918 1043 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RPL10P27635 214 aaKnown RBP11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 SLC5A2P31639 672 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 CHN2P52757 468 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 NAA20P61599 178 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RHPN2Q8IUC4 686 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 FAM178BQ8IXR5 827 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RNF169Q8NCN4 708 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 ETNPPLQ8TBG4 499 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 SPATA7Q9P0W8 599 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
SEC61A1-202ENST00000424880 A8MXQ7 604 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 TMX2-CTNND1H3BSU7 103 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 TPD52L2O43399 206 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 XPOTO43592 962 aaKnown RBP11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 PROCP04070 461 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 ZFXP17010 805 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 RXRGP48443 463 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 CD97P48960 835 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 BBS9Q3SYG4 887 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 FNBP1LQ5T0N5 605 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 SYDE2Q5VT97 1194 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 NCCRP1Q6ZVX7 275 aaPredicted RBP11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 RSPH3Q86UC2 560 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 RNF148Q8N7C7 305 aa11.81□□□□□ -0.52
SEC61A1-202ENST00000424880 POMGNT1Q8WZA1 660 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms