RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 PHLDB3Q6NSJ2 640 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 PEX26Q7Z412 305 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 GLYCTKQ8IVS8 523 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 ARHGEF19Q8IW93 802 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 GSPT2Q8IYD1 628 aaKnown RBP14.96□□□□□ -0.01
ACTN4-203ENST00000424234 CTNNBL1Q8WYA6 563 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-203ENST00000424234 RFFLQ8WZ73 363 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 ZNF558Q96NG5 402 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 NT5C1BQ96P26 610 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 GDF3Q9NR23 364 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 TMEM59LQ9UK28 342 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 YBX2Q9Y2T7 364 aaKnown RBP14.96□□□□□ -0.01
ACTN4-203ENST00000424234 GREB1Q4ZG55 1949 aa14.96□□□□□ -0.01
ACTN4-203ENST00000424234 CA3P07451 260 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 PBX2P40425 430 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 ASPAP45381 313 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 DNA2P51530 1060 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 ARHGAP44Q17R89 818 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 ZNF667Q5HYK9 610 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 DCLRE1AQ6PJP8 1040 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 SCARA5Q6ZMJ2 495 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 SND1Q7KZF4 910 aaKnown RBP eCLIP14.95□□□□□ -0.028e-20■□□□□ 9.3
ACTN4-203ENST00000424234 SPRED2Q7Z698 418 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 SLC39A11Q8N1S5 342 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 TATDN2Q93075 761 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 AGPAT1Q99943 283 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 PBX4Q9BYU1 374 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 NIF3L1Q9GZT8 377 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 UBE2TQ9NPD8 197 aaPredicted RBP14.95□□□□□ -0.02
ACTN4-203ENST00000424234 ADAM28Q9UKQ2 775 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 AMFRQ9UKV5 643 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 CDH23Q9H251 3354 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
ACTN4-203ENST00000424234 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 KPNA7A9QM74 516 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 I3L4J1 428 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 PGRMC1O00264 195 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 FOXN3O00409 490 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 HEXIM1O94992 359 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SYF2O95926 243 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 BRCC3P46736 316 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 ALDH7A1P49419 539 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 WDR72Q3MJ13 1102 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 TIGD5Q53EQ6 642 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 WDR44Q5JSH3 913 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 NT5DC3Q86UY8 548 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 IGSF21Q96ID5 467 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 COLEC11Q9BWP8 271 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SMYD3Q9H7B4 428 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 GDAP2Q9NXN4 497 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 NXF1Q9UBU9 619 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SNX9Q9Y5X1 595 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 ANKRD62A6NC57 917 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 TMCO5BA8MYB1 307 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 CCDC188H7C350 402 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 CEP104O60308 925 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 RNF40O75150 1001 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 ALDH2P05091 517 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 ALS2CLQ60I27 953 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 FUT10Q6P4F1 479 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 DAAM2Q86T65 1068 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 PPM1KQ8N3J5 372 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 RASGEF1CQ8N431 466 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 GOLGA6L1Q8N7Z2 621 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 EIF1ADQ8N9N8 165 aaKnown RBP14.94□□□□□ -0.02
ACTN4-203ENST00000424234 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.94□□□□□ -0.025e-16■■■■■ 130.7
ACTN4-203ENST00000424234 KAT5Q92993 513 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 HES6Q96HZ4 224 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SUSD3Q96L08 255 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 KRT12Q99456 494 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 VN1R3Q9BXE9 311 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 BCO2Q9BYV7 579 aa14.94□□□□□ -0.02
ACTN4-203ENST00000424234 SF3B1O75533 1304 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■■■ 66.7
ACTN4-203ENST00000424234 CARNS1A5YM72 827 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 GOLGA6BA6NDN3 693 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 M0QZQ0 153 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 EFEMP2O95967 443 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 CTNNB1P35222 781 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 PPM1AP35813 382 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 RAP1GAPP47736 663 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 GYS2P54840 703 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 HADHBP55084 474 aaKnown RBP14.93□□□□□ -0.02
ACTN4-203ENST00000424234 GCNT1Q02742 428 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 CUL2Q13617 745 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 TCEAL1Q15170 157 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 RAB30Q15771 203 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 LIMS2Q7Z4I7 341 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 DNAAF5Q86Y56 855 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 RHOT2Q8IXI1 618 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 RNF168Q8IYW5 571 aaPredicted RBP14.93□□□□□ -0.02
ACTN4-203ENST00000424234 SLC35G2Q8TBE7 412 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 SDCBP2Q9H190 292 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 AAASQ9NRG9 546 aa14.93□□□□□ -0.02
ACTN4-203ENST00000424234 CYB561D2O14569 222 aa14.92□□□□□ -0.02
ACTN4-203ENST00000424234 TADA2AO75478 443 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms