RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ABRAXAS1Q6UWZ7 409 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 Q6YL49 198 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 C1orf122Q6ZSJ8 110 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 GDF7Q7Z4P5 450 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 GLB1L2Q8IW92 636 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 FAM114A1Q8IWE2 563 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ESX1Q8N693 406 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ZNF610Q8N9Z0 462 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 USP38Q8NB14 1042 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TTC8Q8TAM2 541 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ACMSDQ8TDX5 336 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CFAP36Q96G28 342 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 BRD8Q9H0E9 1235 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 KCTD10Q9H3F6 313 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 RIOX1Q9H6W3 641 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 AASDHPPTQ9NRN7 309 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 ATP8A2Q9NTI2 1148 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 TCP11L1Q9NUJ3 509 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.17□□□□□ -1.9
PMS1-209ENST00000424059 LAMP5Q9UJQ1 280 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 WDR37Q9Y2I8 494 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 CHST2Q9Y4C5 530 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 NUMBLQ9Y6R0 609 aa3.17□□□□□ -1.9
PMS1-209ENST00000424059 LRRC72A6NJI9 287 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 MCF2LO15068 1137 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 KDM1AO60341 852 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 NMT2O60551 498 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 ALDH1L1O75891 902 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 AGR2O95994 175 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 PCP11498 1178 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 SLC5A1P13866 664 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 RPS2P15880 293 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 YY1P25490 414 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SERPINB3P29508 390 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 RXRGP48443 463 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 CENPAP49450 140 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 RAB27AP51159 221 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 MRPS21P82921 87 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 MXRA7P84157 204 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 LRRC74AQ0VAA2 488 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 TCEA2Q15560 299 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 ERCC6LQ2NKX8 1250 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 CAVIN4Q5BKX8 364 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 RRP12Q5JTH9 1297 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 CAPRIN2Q6IMN6 1127 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 MZT2BQ6NZ67 158 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 LMBR1LQ6UX01 489 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 ATF7IPQ6VMQ6 1270 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SEPT14Q6ZU15 432 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 MAATS1Q7Z4T9 603 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SPATA21Q7Z572 469 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SDCCAG8Q86SQ7 713 aaPredicted RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 ADGRG3Q86Y34 549 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 DZIP1Q86YF9 867 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 SPATA2LQ8IUW3 424 aaPredicted RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 VRK3Q8IV63 474 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SPERTQ8NA61 448 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 SMYD1Q8NB12 490 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 ANKRD7Q92527 254 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 CLMNQ96JQ2 1002 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 NAP1L3Q99457 506 aaPredicted RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 LSM14BQ9BX40 385 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 CPEB1Q9BZB8 566 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 TSGA10Q9BZW7 698 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 DNAI2Q9GZS0 605 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 MMADHCQ9H3L0 296 aaPredicted RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 SPATS2LQ9NUQ6 558 aaKnown RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 DKK2Q9UBU2 259 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 CTNNA3Q9UI47 895 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 RIMKLBQ9ULI2 386 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 EPN1Q9Y6I3 576 aaPredicted RBP3.16□□□□□ -1.9
PMS1-209ENST00000424059 PCSK5Q92824 1860 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 PEG3Q9GZU2 1588 aa3.16□□□□□ -1.9
PMS1-209ENST00000424059 NEBLO76041 1014 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 REC8O95072 547 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 PCDH8O95206 1070 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 STAMBPO95630 424 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 HLA-DOAP06340 250 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 PARP1P09874 1014 aaKnown RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 KRT10P13645 584 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 KRT13P13646 458 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 HSD17B2P37059 387 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 CASRP41180 1078 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 CLCN2P51788 898 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 EPHB1P54762 984 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 HNRNPH2P55795 449 aaKnown RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 APBA1Q02410 837 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 CD69Q07108 199 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 MCL1Q07820 350 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 STK3Q13188 491 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 HLTFQ14527 1009 aaKnown RBP eCLIP3.15□□□□□ -1.91e-6■■■□□ 16.5
PMS1-209ENST00000424059 SF3B3Q15393 1217 aaKnown RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 TTC31Q49AM3 519 aaPredicted RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 KAZNQ674X7 775 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 BTNL9Q6UXG8 535 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 UNQ6494/PRO21346Q6UXR6 183 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 RAPH1Q70E73 1250 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 PDZD4Q76G19 769 aaPredicted RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 DGLUCYQ7Z3D6 616 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms