RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MDH1BQ5I0G3 518 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 PRSS36Q5K4E3 855 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 SMYD5Q6GMV2 418 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 PHLDB3Q6NSJ2 640 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 DPY19L2P1Q6NXN4 242 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 ACOT1Q86TX2 421 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 SPATA2LQ8IUW3 424 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-205ENST00000423941 ZNF512Q96ME7 567 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-205ENST00000423941 NT5C1BQ96P26 610 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 NT5C1AQ9BXI3 368 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 ELOVL4Q9GZR5 314 aa19.66■□□□□ 0.74
HDAC6-205ENST00000423941 NAT10Q9H0A0 1025 aaKnown RBP19.66■□□□□ 0.74
HDAC6-205ENST00000423941 ACO1P21399 889 aaKnown RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 CDR1P51861 262 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 RAD23BP54727 409 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 IQCB1Q15051 598 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 TRIM65Q6PJ69 517 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 APTXQ7Z2E3 356 aaKnown RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 DNAJB7Q7Z6W7 309 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 TMC8Q8IU68 726 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 CREBRFQ8IUR6 639 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 DHX40Q8IX18 779 aaKnown RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 ZDHHC14Q8IZN3 488 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 FUKQ8N0W3 1084 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 LEMD2Q8NC56 503 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 JAKMIP2Q96AA8 810 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 NECAB3Q96P71 396 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 INTS2Q9H0H0 1204 aaKnown RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 TMEM30AQ9NV96 361 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 LIMA1Q9UHB6 759 aaKnown RBP19.65■□□□□ 0.74
HDAC6-205ENST00000423941 CNTN6Q9UQ52 1028 aa19.65■□□□□ 0.74
HDAC6-205ENST00000423941 MOSPD3O75425 235 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 HMGA1P17096 107 aaKnown RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SLC9A1P19634 815 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 BDNFP23560 247 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 PON1P27169 355 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 CCR2P41597 374 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF165P49910 485 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 RPL10AP62906 217 aaKnown RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 LRMPQ12912 555 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 KRT31Q15323 416 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SLC5A9Q2M3M2 681 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 PABPC1LQ4VXU2 614 aaKnown RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 IQCEQ6IPM2 695 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 POTEHQ6S545 545 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 GBP6Q6ZN66 633 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 ARHGEF19Q8IW93 802 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 HS6ST3Q8IZP7 471 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 ELMOD1Q8N336 334 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SLC4A11Q8NBS3 891 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SPATA17Q96L03 361 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 MYRFLQ96LU7 910 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 UHRF1Q96T88 793 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SEPT5Q99719 369 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 HNRNPABQ99729 332 aaKnown RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 COL25A1Q9BXS0 654 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-205ENST00000423941 CSNK1G1Q9HCP0 422 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 SIX2Q9NPC8 291 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 GCNT4Q9P109 453 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 NR2E1Q9Y466 385 aa19.64■□□□□ 0.73
HDAC6-205ENST00000423941 MYO10Q9HD67 2058 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF638Q14966 1978 aaKnown RBP19.63■□□□□ 0.73
HDAC6-205ENST00000423941 C2CD4DB7Z1M9 353 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 NRG2O14511 850 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-205ENST00000423941 CD58P19256 250 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 FSHRP23945 695 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 GPR15P49685 360 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 CYP27A1Q02318 531 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 KCNMA1Q12791 1236 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 DDR2Q16832 855 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 EXOC3L4Q17RC7 722 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 OTOP3Q7RTS5 596 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 ITIH5Q86UX2 942 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 GJD3Q8N144 294 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 AOPEPQ8N6M6 819 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 C12orf29Q8N999 325 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 ITFG1Q8TB96 612 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 KAT5Q92993 513 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 TMEM176AQ96HP8 235 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 KREMEN1Q96MU8 473 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 MYADMQ96S97 322 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 CORO1BQ9BR76 489 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 CRACR2AQ9BSW2 395 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF518BQ9C0D4 1074 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 IL21Q9HBE4 155 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 EPS15L1Q9UBC2 864 aa19.63■□□□□ 0.73
HDAC6-205ENST00000423941 ZFP37Q9Y6Q3 630 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-205ENST00000423941 OBSL1O75147 1896 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 CLDN5O00501 218 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 ZNF197O14709 1029 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 NOL4O94818 638 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 CLSTN1O94985 981 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 CACNA2D1P54289 1103 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 YWHAEP62258 255 aaKnown RBP19.62■□□□□ 0.73
HDAC6-205ENST00000423941 ORC1Q13415 861 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 PPM1KQ8N3J5 372 aa19.62■□□□□ 0.73
HDAC6-205ENST00000423941 TRMT2BQ96GJ1 504 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms