RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MYCBPAPQ8TBZ2 947 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 HDAC7Q8WUI4 952 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 MYLPFQ96A32 169 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 HEXIM2Q96MH2 286 aaKnown RBP9.88□□□□□ -0.83
PDGFC-202ENST00000422544 LSM14BQ9BX40 385 aaKnown RBP9.88□□□□□ -0.83
PDGFC-202ENST00000422544 NT5C1AQ9BXI3 368 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 C1QTNF1Q9BXJ1 281 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 RTN4Q9NQC3 1192 aaKnown RBP9.88□□□□□ -0.83
PDGFC-202ENST00000422544 DZANK1Q9NVP4 752 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 APEX2Q9UBZ4 518 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 DPP7Q9UHL4 492 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 COG5Q9UP83 839 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 PCDHB4Q9Y5E5 795 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 FRYLO94915 3013 aa9.88□□□□□ -0.83
PDGFC-202ENST00000422544 CACNA1AO00555 2505 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CCDC195A0A1B0GUA6 201 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 HAX1O00165 279 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CLDN5O00501 218 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 GPR37L1O60883 481 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 ZMYND10O75800 440 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SOAT2O75908 522 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 HOXB8P17481 243 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CYP2F1P24903 491 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 RAD23BP54727 409 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 MFAP3P55082 362 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 YWHAEP62258 255 aaKnown RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 GCNT1Q02742 428 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SMARCB1Q12824 385 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 NR1I3Q14994 352 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SYCP1Q15431 976 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 MAPRE1Q15691 268 aaKnown RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 ARHGAP44Q17R89 818 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 MGAT5BQ3V5L5 792 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 KLHDC7AQ5VTJ3 777 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CCDC149Q6ZUS6 474 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 TCEAL8Q8IYN2 117 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 TTC39CQ8N584 583 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 UBR7Q8N806 425 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 C12orf29Q8N999 325 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SLC4A11Q8NBS3 891 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 C2orf15Q8WU43 125 aaKnown RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 PCED1BQ96HM7 432 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 TMEM176AQ96HP8 235 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 MSLNLQ96KJ4 702 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 TNIP3Q96KP6 325 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SEPT5Q99719 369 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 B3GNT5Q9BYG0 378 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 RHOBTB2Q9BYZ6 727 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 S1PR5Q9H228 398 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SFXN1Q9H9B4 322 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CD207Q9UJ71 328 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 CDH22Q9UJ99 828 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 DNAJC12Q9UKB3 198 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 AJAP1Q9UKB5 411 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-202ENST00000422544 MAFFQ9ULX9 164 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 SIK3Q9Y2K2 1263 aa9.87□□□□□ -0.83
PDGFC-202ENST00000422544 ZFHX2Q9C0A1 2572 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 A0A1B0GTH6 734 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 CCL16O15467 120 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 NOL4O94818 638 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 KRT5P13647 590 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 CCDC130P13994 396 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 BDNFP23560 247 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 TUFMP49411 452 aaKnown RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 GPR15P49685 360 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 UBASH3AP57075 661 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 TWF1Q12792 350 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 SDHAF4Q5VUM1 108 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 TMEM270Q6UE05 265 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 C4orf50Q6ZRC1 276 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 PAQR9Q6ZVX9 377 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 RTL10Q7L3V2 364 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ENOSF1Q7L5Y1 443 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ZNF707Q96C28 371 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ERGIC2Q96RQ1 377 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ANP32EQ9BTT0 268 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 MED10Q9BTT4 135 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 PRKD2Q9BZL6 878 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ZNF518BQ9C0D4 1074 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ADAM7Q9H2U9 754 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 FAM124BQ9H5Z6 455 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ABCB6Q9NP58 842 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 PLCB1Q9NQ66 1216 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 FAM207AQ9NSI2 230 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-202ENST00000422544 FAM49BQ9NUQ9 324 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 ZDHHC7Q9NXF8 308 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 IFNKQ9P0W0 207 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 YIPF1Q9Y548 306 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 INSL5Q9Y5Q6 135 aa9.86□□□□□ -0.83
PDGFC-202ENST00000422544 FHOD1Q9Y613 1164 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms