RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 SLC9A9Q8IVB4 645 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 CELF5Q8N6W0 485 aaKnown RBP19.02■□□□□ 0.64
HDLBP-208ENST00000422080 BPIFB1Q8TDL5 484 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 ZNF516Q92618 1163 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 TRMT2BQ96GJ1 504 aaKnown RBP19.02■□□□□ 0.64
HDLBP-208ENST00000422080 MMS19Q96T76 1030 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 SYT15Q9BQS2 421 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 IER2Q9BTL4 223 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 SCAND2PQ9GZW5 306 aaPredicted RBP19.02■□□□□ 0.64
HDLBP-208ENST00000422080 GZF1Q9H116 711 aaPredicted RBP19.02■□□□□ 0.64
HDLBP-208ENST00000422080 DMAC2Q9NW81 257 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 NDRG2Q9UN36 371 aaKnown RBP19.02■□□□□ 0.64
HDLBP-208ENST00000422080 R4GN57 208 aa19.02■□□□□ 0.64
HDLBP-208ENST00000422080 HCRTO43612 131 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 ATP2C2O75185 946 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 TACC1O75410 805 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 LMNAP02545 664 aaKnown RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 ATICP31939 592 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 GNL1P36915 607 aaPredicted RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 SYKP43405 635 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 AP3M2P53677 418 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 TRPC3Q13507 836 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 SDHAF4Q5VUM1 108 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 MON1AQ86VX9 555 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 KIAA0895Q8NCT3 520 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 MRPS31Q92665 395 aaKnown RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 CEP295NLQ96MC4 621 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 CHRDQ9H2X0 955 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 LMAN1LQ9HAT1 526 aa19.01■□□□□ 0.63
HDLBP-208ENST00000422080 THG1LQ9NWX6 298 aaKnown RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 MAGEC2Q9UBF1 373 aaPredicted RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 MAGED2Q9UNF1 606 aaPredicted RBP19.01■□□□□ 0.63
HDLBP-208ENST00000422080 SLC38A8A6NNN8 435 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 PDGFRBP09619 1106 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 CCNE1P24864 410 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 AVPR1AP37288 418 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 KPNA1P52294 538 aaPredicted RBP19■□□□□ 0.63
HDLBP-208ENST00000422080 CLDN10P78369 228 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 CSTF1Q05048 431 aaKnown RBP19■□□□□ 0.63
HDLBP-208ENST00000422080 CCDC142Q17RM4 750 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 WDR72Q3MJ13 1102 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 VSTM1Q6UX27 236 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 RALGPS2Q86X27 583 aaPredicted RBP19■□□□□ 0.63
HDLBP-208ENST00000422080 MAB21L3Q8N8X9 362 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 MYCBPAPQ8TBZ2 947 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 SNX25Q9H3E2 840 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 KCTD10Q9H3F6 313 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 CRTAC1Q9NQ79 661 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 COL4A3Q01955 1670 aa19■□□□□ 0.63
HDLBP-208ENST00000422080 A0A1W2PQ27 194 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 A0A1W2PQ64 194 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 A0A1W2PQD8 194 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 PDXKO00764 312 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 CHRNB1P11230 501 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 NDUFA8P51970 172 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 PSMC1P62191 440 aaKnown RBP18.99■□□□□ 0.63
HDLBP-208ENST00000422080 TNNC1P63316 161 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 MTAPQ13126 283 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 TXNDC8Q6A555 127 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 SCN4BQ8IWT1 228 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 PARD3BQ8TEW8 1205 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 MYLPFQ96A32 169 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-208ENST00000422080 CHAMP1Q96JM3 812 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 SPATA17Q96L03 361 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 MRPL45Q9BRJ2 306 aaKnown RBP18.99■□□□□ 0.63
HDLBP-208ENST00000422080 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 VRTNQ9H8Y1 702 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 KIF9Q9HAQ2 790 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 PRMT8Q9NR22 394 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-208ENST00000422080 VPS13AQ96RL7 3174 aa18.99■□□□□ 0.63
HDLBP-208ENST00000422080 SPECC1L-ADORA2AF8WAN1 911 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 PHACTR2O75167 634 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 KIF20AO95235 890 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 RPN1P04843 607 aaKnown RBP18.98■□□□□ 0.63
HDLBP-208ENST00000422080 MYL6P60660 151 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 ZNF268Q14587 947 aaPredicted RBP18.98■□□□□ 0.63
HDLBP-208ENST00000422080 OR6B3Q8NGW1 331 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 PLEKHO2Q8TD55 490 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 NELL1Q92832 810 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 USP13Q92995 863 aaPredicted RBP18.98■□□□□ 0.63
HDLBP-208ENST00000422080 CCDC47Q96A33 483 aaKnown RBP18.98■□□□□ 0.63
HDLBP-208ENST00000422080 FAM83CQ9BQN1 747 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 SMG9Q9H0W8 520 aaKnown RBP18.98■□□□□ 0.63
HDLBP-208ENST00000422080 TDP1Q9NUW8 608 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 ZSCAN32Q9NX65 697 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 GTSE1Q9NYZ3 720 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 PCDHGA2Q9Y5H1 932 aa18.98■□□□□ 0.63
HDLBP-208ENST00000422080 KINO60870 393 aaKnown RBP18.97■□□□□ 0.63
HDLBP-208ENST00000422080 TADA3O75528 432 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 C4BPAP04003 597 aaKnown RBP18.97■□□□□ 0.63
HDLBP-208ENST00000422080 BDNFP23560 247 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 CTHP32929 405 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 GRIK1P39086 918 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 CASP4P49662 377 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 LRRC32Q14392 662 aa18.97■□□□□ 0.63
HDLBP-208ENST00000422080 FSIP1Q8NA03 581 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms