RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
CMSS1-201ENST00000421999 VDRP11473 427 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 EPHB2P29323 1055 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 WEE1P30291 646 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 PPARGP37231 505 aaPredicted RBP10.22□□□□□ -0.77
CMSS1-201ENST00000421999 CDR2Q01850 454 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 SMTNL2Q2TAL5 461 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 ZBTB41Q5SVQ8 909 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 PALB2Q86YC2 1186 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 OSBPL9Q96SU4 736 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 SLC28A3Q9HAS3 691 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 METTL5Q9NRN9 209 aaKnown RBP10.22□□□□□ -0.77
CMSS1-201ENST00000421999 SMPD4Q9NXE4 827 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 UVRAGQ9P2Y5 699 aa10.22□□□□□ -0.77
CMSS1-201ENST00000421999 FRMD3A2A2Y4 597 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 TLL1O43897 1013 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 CRYBB1P53674 252 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 FIBCD1Q8N539 461 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 HELQQ8TDG4 1101 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ALKBH8Q96BT7 664 aaKnown RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF558Q96NG5 402 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 DDX47Q9H0S4 455 aaKnown RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 RSPH14Q9UHP6 348 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 SLC4A7Q9Y6M7 1214 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 SDK1Q7Z5N4 2213 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 A0A1B0GUL6 1792 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 NT5C1B-RDH14C9J2C7 533 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 CCDC188H7C350 402 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 C22orf31O95567 290 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 DARSP14868 501 aaKnown RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 EFEMP1Q12805 493 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 CDH18Q13634 790 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ZCWPW2Q504Y3 356 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 PHLDB3Q6NSJ2 640 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 C7orf61Q8IZ16 206 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ZSWIM2Q8NEG5 633 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 C1orf54Q8WWF1 131 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 VPS39Q96JC1 886 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 RILPQ96NA2 401 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ZIC5Q96T25 663 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 FTHL17Q9BXU8 183 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 DDX56Q9NY93 547 aaKnown RBP10.21□□□□□ -0.77
CMSS1-201ENST00000421999 TBK1Q9UHD2 729 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 ARAP2Q8WZ64 1704 aa10.21□□□□□ -0.77
CMSS1-201ENST00000421999 KPNA7A9QM74 516 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 CALCAP01258 141 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 CA4P22748 312 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 MSH2P43246 934 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 SLCO1A2P46721 670 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 CENPUQ71F23 418 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 EPM2AIP1Q7L775 607 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 REXO1L1PQ8IX06 675 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 NXF3Q9H4D5 531 aaKnown RBP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 BFARQ9NZS9 450 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 ITGA11Q9UKX5 1188 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 MAST2Q6P0Q8 1798 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 COL1A2P08123 1366 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 PODXLO00592 558 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 APOL1O14791 398 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 GMNNO75496 209 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 S100BP04271 92 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 ZFXP17010 805 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 EDNRBP24530 442 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 CTCFP49711 727 aaPredicted RBP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 BCAT1P54687 386 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 BRD3Q15059 726 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 TAPT1Q6NXT6 567 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 CCDC62Q6P9F0 684 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 SENP8Q96LD8 212 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 FMO2Q99518 471 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.78
CMSS1-201ENST00000421999 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 PCDHB5Q9Y5E4 795 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 PCDHA2Q9Y5H9 948 aa10.21□□□□□ -0.78
CMSS1-201ENST00000421999 COL11A2P13942 1736 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 PPP1R12AO14974 1030 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ZNF185O15231 689 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 SLC11A2P49281 568 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 NDST1P52848 882 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 PRAMEP78395 509 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 C17orf99Q6UX52 265 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 SARS2Q9NP81 518 aaKnown RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 RNF186Q9NXI6 227 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 AIPL1Q9NZN9 384 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 SLC12A8A0AV02 714 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 EEF2KO00418 725 aaKnown RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ACSL3O95573 720 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 TMEM253P0C7T8 217 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 GPD1P21695 349 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
CMSS1-201ENST00000421999 MAP2K2P36507 400 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 VEGFBP49765 207 aa10.2□□□□□ -0.78
CMSS1-201ENST00000421999 ROR1Q01973 937 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms