RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TGFBRAP1Q8WUH2 860 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 SEZ6LQ9BYH1 1024 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 TGIF2Q9GZN2 237 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 SIL1Q9H173 461 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 ARHGEF4Q9NR80 690 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 ST7Q9NRC1 585 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 AATFQ9NY61 560 aaKnown RBP eCLIP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 RCAN3Q9UKA8 241 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 ZHX1Q9UKY1 873 aaPredicted RBP5.86□□□□□ -1.47
SFXN1-202ENST00000421887 CBLCQ9ULV8 474 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 SORCS3Q9UPU3 1222 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 COX11Q9Y6N1 276 aa5.86□□□□□ -1.47
SFXN1-202ENST00000421887 WDFY4Q6ZS81 3184 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CLASP2O75122 1294 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 PPFIA4O75335 1185 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CABYRO75952 493 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 FLOT1O75955 427 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CD4P01730 458 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 PGK2P07205 417 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SRGAP2CP0DJJ0 459 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CST5P28325 142 aaPredicted RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 GNL2Q13823 731 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 MVPQ14764 893 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CRY1Q16526 586 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 ABCB5Q2M3G0 1257 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SHROOM1Q2M3G4 852 aaPredicted RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CERKLQ49MI3 558 aaPredicted RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 GORABQ5T7V8 394 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 NOL8Q76FK4 1167 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 DEFB128Q7Z7B8 93 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 BCL6BQ8N143 479 aaPredicted RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 MSL3Q8N5Y2 521 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 ANKRD44Q8N8A2 993 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 PRSS33Q8NF86 280 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SGSM3Q96HU1 749 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SCLYQ96I15 445 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 GBP4Q96PP9 640 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 FTOQ9C0B1 505 aaKnown RBP eCLIP5.85□□□□□ -1.47
SFXN1-202ENST00000421887 DNAJC18Q9H819 358 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 CAPN10Q9HC96 672 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 MTUS1Q9ULD2 1270 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 PCDHA8Q9Y5H6 950 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 HS3ST4Q9Y661 456 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SIP14410 1827 aa5.85□□□□□ -1.47
SFXN1-202ENST00000421887 SCN5AQ14524 2016 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 MCM3APO60318 1980 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 MYH8P13535 1937 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 FLT1P17948 1338 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 UMODL1Q5DID0 1318 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 C2orf78A6NCI8 922 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 MYADML2A6NDP7 307 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 ZEB2O60315 1214 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 CIAO1O76071 339 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SUPT20HL2P0C7V6 817 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 APEX1P27695 318 aaKnown RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 COPB2P35606 906 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 IL15P40933 162 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 ITGA7Q13683 1181 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SEC23AQ15436 765 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SP5Q6BEB4 398 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 CCSAPQ6IQ19 270 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 NAA16Q6N069 864 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 MAMDC2Q7Z304 686 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 HERC6Q8IVU3 1022 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 ADHFE1Q8IWW8 467 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SPATA5Q8NB90 893 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 GDPD5Q8WTR4 605 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 ASB15Q8WXK1 588 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 ANKS1AQ92625 1134 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 FAM193BQ96PV7 902 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SAP30BPQ9UHR5 308 aaKnown RBP5.84□□□□□ -1.47
SFXN1-202ENST00000421887 CTNNA3Q9UI47 895 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 SERPINB13Q9UIV8 391 aa5.84□□□□□ -1.47
SFXN1-202ENST00000421887 PTPRZ1P23471 2315 aaPredicted RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 H3BQ06 376 aaPredicted RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 MPHOSPH10O00566 681 aaKnown RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 SCDO00767 359 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 LPXNO60711 386 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 ADORA1P30542 326 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 SESN2P58004 480 aaPredicted RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 TIMM10P62072 90 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 TCF15Q12870 199 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 ACVR2BQ13705 512 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 PTPROQ16827 1216 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CCDC144BQ3MJ40 725 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 YOD1Q5VVQ6 348 aaPredicted RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 C1QL3Q5VWW1 255 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 FBXO42Q6P3S6 717 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CXCL17Q6UXB2 119 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 ATG9AQ7Z3C6 839 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 BMP8AQ7Z5Y6 402 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 PCDH19Q8TAB3 1148 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CALML6Q8TD86 181 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 ACER1Q8TDN7 264 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 ARL8AQ96BM9 186 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 NEUROD6Q96NK8 337 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms