RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PCED1BQ96HM7 432 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 FUBP3Q96I24 572 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ARID3AQ99856 593 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 INTS2Q9H0H0 1204 aaKnown RBP16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ABCB6Q9NP58 842 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 ASAH2Q9NR71 780 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 CISHQ9NSE2 258 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 CEP72Q9P209 647 aa16.78■□□□□ 0.28
BRAT1-202ENST00000421712 DOCK6Q96HP0 2047 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 ATP8B3O60423 1300 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 SMTNL1A8MU46 457 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 CLDN5O00501 218 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 PAPLNO95428 1278 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 POU2F2P09086 479 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 ANXA13P27216 316 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 GPR15P49685 360 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 DDR2Q16832 855 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 ZSCAN23Q3MJ62 389 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 SDHAF4Q5VUM1 108 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 PDZD4Q76G19 769 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-202ENST00000421712 RRAGAQ7L523 313 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 OTOP3Q7RTS5 596 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-202ENST00000421712 HS6ST3Q8IZP7 471 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 GJD3Q8N144 294 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.28
BRAT1-202ENST00000421712 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.28
BRAT1-202ENST00000421712 NDST4Q9H3R1 872 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 HMGXB4Q9UGU5 601 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 MRPS23Q9Y3D9 190 aaKnown RBP16.77■□□□□ 0.28
BRAT1-202ENST00000421712 ASB3Q9Y575 518 aa16.77■□□□□ 0.28
BRAT1-202ENST00000421712 C5orf42Q9H799 3197 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 BECN2A8MW95 431 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 ZNF197O14709 1029 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 CILPO75339 1184 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 ZNF165P49910 485 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 INCA1Q0VD86 236 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 EXOC3L4Q17RC7 722 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 CFAP221Q4G0U5 840 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 CRYBG2Q8N1P7 616 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 C12orf29Q8N999 325 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 LMO3Q8TAP4 145 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 B3GNT5Q9BYG0 378 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 VPS16Q9H269 839 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 FAM49BQ9NUQ9 324 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 MAGED2Q9UNF1 606 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-202ENST00000421712 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
BRAT1-202ENST00000421712 C2CD4DB7Z1M9 353 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 ATF6P18850 670 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 SLC9A1P19634 815 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 MAGEA11P43364 429 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 LEMD2Q8NC56 503 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 ITFG1Q8TB96 612 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 PSMG2Q969U7 264 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 TWNKQ96RR1 684 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 ELOVL4Q9GZR5 314 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 UBE2TQ9NPD8 197 aaPredicted RBP16.75■□□□□ 0.27
BRAT1-202ENST00000421712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.75■□□□□ 0.27
BRAT1-202ENST00000421712 USTQ9Y2C2 406 aa16.75■□□□□ 0.27
BRAT1-202ENST00000421712 GTPBP10A4D1E9 387 aaKnown RBP16.74■□□□□ 0.27
BRAT1-202ENST00000421712 LOC730098B7Z3J9 87 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 TRIM66O15016 1216 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 CSH1P0DML2 217 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 CSH2P0DML3 217 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 CCDC130P13994 396 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 ADORA2BP29275 332 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 KRT31Q15323 416 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 MIIPQ5JXC2 388 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 ARHGEF19Q8IW93 802 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 SLC2A14Q8TDB8 520 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 WHAMMQ8TF30 809 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 KAT5Q92993 513 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 CYFIP2Q96F07 1278 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 GCNAQ96QF7 691 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 MYADMQ96S97 322 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 COL25A1Q9BXS0 654 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-202ENST00000421712 LIMD1Q9UGP4 676 aa16.74■□□□□ 0.27
BRAT1-202ENST00000421712 C19orf67A6NJJ6 358 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 SLC38A8A6NNN8 435 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 F8VP50 259 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 AP1G2O75843 785 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 GJA1P17302 382 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 PON1P27169 355 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 RAD23BP54727 409 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 MFAP3P55082 362 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 MTMR3Q13615 1198 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 NCAPHQ15003 741 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 SLC5A9Q2M3M2 681 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms