RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 MYLPFQ96A32 169 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 TCF25Q9BQ70 676 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 NGRNQ9NPE2 291 aaKnown RBP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 ENTPD7Q9NQZ7 604 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 ADAMTS1Q9UHI8 967 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 TSPAN16Q9UKR8 245 aa13.25□□□□□ -0.29
TMEM53-206ENST00000420706 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM53-206ENST00000420706 WDR27A2RRH5 827 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 SOWAHDA6NJG2 315 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CLDN5O00501 218 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 TEX28O15482 410 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 ABLIM3O94929 683 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CYP1A1P04798 512 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CPB1P15086 417 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 ANXA13P27216 316 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 IRS1P35568 1242 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CDR1P51861 262 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 ROR1Q01973 937 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CYP27A1Q02318 531 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CREMQ03060 361 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 SMARCB1Q12824 385 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 RAB33AQ14088 237 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 SMC1AQ14683 1233 aaKnown RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 NFE2Q16621 373 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 GOLGA7BQ2TAP0 167 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 PDE12Q6L8Q7 609 aaKnown RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 DENND1BQ6P3S1 775 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 RAD9BQ6WBX8 426 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 RNF19BQ6ZMZ0 732 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 C4orf50Q6ZRC1 276 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 VPS36Q86VN1 386 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 TTC30AQ86WT1 665 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 WDTC1Q8N5D0 677 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 MRPL43Q8N983 215 aaKnown RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 ZNF461Q8TAF7 563 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 MICAL1Q8TDZ2 1067 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 LMAN2LQ9H0V9 348 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 LHX5Q9H2C1 402 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 KCNF1Q9H3M0 494 aa13.24□□□□□ -0.29
TMEM53-206ENST00000420706 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
TMEM53-206ENST00000420706 A0A087X0T9 212 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 MTMR11A4FU01 709 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 HIDE1A8MVS5 230 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 RFXAPO00287 272 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 AKR1B10O60218 316 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 VNN2O95498 520 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 FAM228BP0C875 321 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 CDH5P33151 784 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 CA8P35219 290 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 GPD2P43304 727 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 NDUFV1P49821 464 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 MTF1Q14872 753 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 FAM35AQ86V20 835 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 PALB2Q86YC2 1186 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 SPATA2LQ8IUW3 424 aaPredicted RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 FUBP3Q96I24 572 aaKnown RBP eCLIP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 PGLYRP2Q96PD5 576 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 DUSP16Q9BY84 665 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 ZNF518BQ9C0D4 1074 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 ZNF576Q9H609 170 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 HESX1Q9UBX0 185 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 AFF4Q9UHB7 1163 aaKnown RBP13.23□□□□□ -0.29
TMEM53-206ENST00000420706 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 PCDHB5Q9Y5E4 795 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
TMEM53-206ENST00000420706 M0QYV0 167 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 ARHGAP6O43182 974 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 NRDCO43847 1150 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 LPXNO60711 386 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 BEST1O76090 585 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 CSPG5O95196 566 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 GZMAP12544 262 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 BDNFP23560 247 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 CYP2F1P24903 491 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 CYLC1P35663 651 aaPredicted RBP13.22□□□□□ -0.29
TMEM53-206ENST00000420706 KIF11P52732 1056 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 NOMO3P69849 1222 aa13.22□□□□□ -0.29
TMEM53-206ENST00000420706 GFPT1Q06210 699 aaPredicted RBP13.22□□□□□ -0.29
TMEM53-206ENST00000420706 PDE4CQ08493 712 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms