RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 PHAXQ9H814 394 aaKnown RBP4.26□□□□□ -1.73
CNGA1-203ENST00000420489 MAP3K2Q9Y2U5 619 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 TRPV2Q9Y5S1 764 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 SPAG17Q6Q759 2223 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 WDFY4Q6ZS81 3184 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 LRRK1Q38SD2 2015 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 WDR87Q6ZQQ6 2873 aa4.26□□□□□ -1.73
CNGA1-203ENST00000420489 MN1Q10571 1320 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 IGSF9BQ9UPX0 1349 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 CHRNA1P02708 482 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 GNSP15586 552 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PSMC3P17980 439 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 SHMT1P34896 483 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 GDNFP39905 211 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 SPIRE1Q08AE8 756 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 SLBPQ14493 270 aaKnown RBP eCLIP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 KCNMB1Q16558 191 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 RABL6Q3YEC7 729 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 LONRF3Q496Y0 759 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM196Q5HYL7 178 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 WIPI1Q5MNZ9 446 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 KIAA0895LQ68EN5 471 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 KRBA2Q6ZNG9 492 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 RTN4RL1Q86UN2 441 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MFSD6LQ8IWD5 586 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MCEMP1Q8IX19 187 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PLPPR2Q96GM1 343 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PLEKHF1Q96S99 279 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 C16orf70Q9BSU1 422 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 HEBP1Q9NRV9 189 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 DNMT3BQ9UBC3 853 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PRAMEF27A3QJZ7 478 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PLK4O00444 970 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 ZNF263O14978 683 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 VPS4BO75351 444 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 HSPA5P11021 654 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MRPS6P82932 125 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 RPL6Q02878 288 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PSMD2Q13200 908 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 ARHGAP29Q52LW3 1261 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 GAL3ST3Q96A11 431 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 CCNL2Q96S94 520 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MIPEPQ99797 713 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 FUCA2Q9BTY2 467 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 UBA5Q9GZZ9 404 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 PRKRIP1Q9H875 184 aaPredicted RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 KANSL2Q9H9L4 492 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 MRPL17Q9NRX2 175 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 NDRG2Q9UN36 371 aaKnown RBP4.25□□□□□ -1.73
CNGA1-203ENST00000420489 VPS4AQ9UN37 437 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 CTNND2Q9UQB3 1225 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 CAPN6Q9Y6Q1 641 aa4.25□□□□□ -1.73
CNGA1-203ENST00000420489 A0A1W2PRG0 241 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RRN3P2A6NIE6 340 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 TXNP10599 105 aaKnown RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 TGFB3P10600 412 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 JUPP14923 745 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RAC2P15153 192 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 PAX3P23760 479 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 FCARP24071 287 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RIPK4P57078 832 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 DAB2P98082 770 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 FCHO2Q0JRZ9 810 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 APOBRQ0VD83 1088 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 KCNAB2Q13303 367 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CNGB1Q14028 1251 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 TBR1Q16650 682 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 NKPD1Q17RQ9 610 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 LETMD1Q6P1Q0 360 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 GET4Q7L5D6 327 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CDH24Q86UP0 819 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 WDR63Q8IWG1 891 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 VPS52Q8N1B4 723 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 PIGKQ92643 395 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 FGF13Q92913 245 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 IGSF21Q96ID5 467 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 SLC29A3Q9BZD2 475 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 USP29Q9HBJ7 922 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CPNE5Q9HCH3 593 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CDH22Q9UJ99 828 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RPH3AQ9Y2J0 694 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 DBX1A6NMT0 343 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CLGNO14967 610 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RNF113AO15541 343 aaKnown RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 SLITRK5O94991 958 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 WEE2P0C1S8 567 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 BPIP17213 487 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 PROZP22891 400 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 MCM2P49736 904 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 YARSP54577 528 aaKnown RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 MECOMQ03112 1051 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 CDCP2Q5VXM1 449 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 HAUS6Q7Z4H7 955 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 SMC5Q8IY18 1101 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 RPS6KC1Q96S38 1066 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 SRRTQ9BXP5 876 aaKnown RBP4.24□□□□□ -1.73
CNGA1-203ENST00000420489 ZFP14Q9HCL3 533 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 SEMA3GQ9NS98 782 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms