RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NXF1Q9UBU9 619 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 ITGA11Q9UKX5 1188 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 AGAP1Q9UPQ3 857 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 DERAQ9Y315 318 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 IPPQ9Y573 584 aa14.04□□□□□ -0.16
HLA-DMB-258ENST00000418107 CTSAP10619 480 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 ITGA4P13612 1032 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 POLR2BP30876 1174 aaKnown RBP14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 ATICP31939 592 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 ARHGAP25P42331 645 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 GUCY2FP51841 1108 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 UBXN11Q5T124 520 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 TMC5Q6UXY8 1006 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 GLYCTKQ8IVS8 523 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 SLC22A17Q8WUG5 538 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 SLC20A1Q8WUM9 679 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 ARID3AQ99856 593 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 TFR2Q9UP52 801 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 USTQ9Y2C2 406 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 INPP5FQ9Y2H2 1132 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
HLA-DMB-258ENST00000418107 MACROD2A1Z1Q3 448 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 TMCO5BA8MYB1 307 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 CD58P19256 250 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 CLCN5P51795 746 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 MYO1EQ12965 1108 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 NAB2Q15742 525 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 WDR72Q3MJ13 1102 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 GLRA4Q5JXX5 417 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 CWF19L1Q69YN2 538 aaKnown RBP14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 TMEM270Q6UE05 265 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 ZNF662Q6ZS27 426 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 DDX53Q86TM3 631 aaKnown RBP14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 SLC47A2Q86VL8 602 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 FLCNQ8NFG4 579 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 SECISBP2LQ93073 1101 aaKnown RBP14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 HPDLQ96IR7 371 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 NRDE2Q9H7Z3 1164 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 TBC1D13Q9NVG8 400 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 MYO1AQ9UBC5 1043 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 TRIM10Q9UDY6 481 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 NAGPAQ9UK23 515 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 PAXBP1Q9Y5B6 917 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 IRAK3Q9Y616 596 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 SCN1AP35498 2009 aa14.02□□□□□ -0.17
HLA-DMB-258ENST00000418107 GVINP1Q7Z2Y8 2422 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 RCCD1A6NED2 376 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 MEIS3P2A8K0S8 358 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 DDX3XO00571 662 aaKnown RBP eCLIP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 PJA2O43164 708 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 TACC1O75410 805 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 H2AFZP0C0S5 128 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 CYP11B1P15538 503 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 TNNC1P63316 161 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 GLB1LQ6UWU2 654 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 H2AFVQ71UI9 128 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 RBBP8NLQ8NC74 664 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 SMG8Q8ND04 991 aaKnown RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 LNX1Q8TBB1 728 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 NKD2Q969F2 451 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 RPS6KC1Q96S38 1066 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 VN1R3Q9BXE9 311 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 IRX2Q9BZI1 471 aaPredicted RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 LACRTQ9GZZ8 138 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 FAM105AQ9NUU6 356 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 CNTN3Q9P232 1028 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 DNAJB4Q9UDY4 337 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 SIX4Q9UIU6 781 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 UBQLN1Q9UMX0 589 aaKnown RBP14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 POLIQ9UNA4 740 aa14.01□□□□□ -0.17
HLA-DMB-258ENST00000418107 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 B4GALT3O60512 393 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 ABL1P00519 1130 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 GALTP07902 379 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 SLC11A1P49279 550 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 RAB27AP51159 221 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 FOXK2Q01167 660 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 RNASELQ05823 741 aaKnown RBP14□□□□□ -0.17
HLA-DMB-258ENST00000418107 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 SCARA3Q6AZY7 606 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 CCDC149Q6ZUS6 474 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 NOP9Q86U38 636 aaKnown RBP14□□□□□ -0.17
HLA-DMB-258ENST00000418107 SLC35F6Q8N357 371 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 TMEM130Q8N3G9 435 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 EPS8L1Q8TE68 723 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 MMS19Q96T76 1030 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 TRAIPQ9BWF2 469 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 XYLT2Q9H1B5 865 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 SFXN1Q9H9B4 322 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 DCHS1Q96JQ0 3298 aa14□□□□□ -0.17
HLA-DMB-258ENST00000418107 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
HLA-DMB-258ENST00000418107 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
HLA-DMB-258ENST00000418107 THAP12O43422 761 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms