RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 RARAP10276 462 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 ITGA4P13612 1032 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 ATF2P15336 505 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 RRM1P23921 792 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 GRM5P41594 1212 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 GABRB2P47870 512 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 YARSP54577 528 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 PLTPP55058 493 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 RNASE9P60153 205 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 TLE2Q04725 743 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 MBTD1Q05BQ5 628 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 INCA1Q0VD86 236 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 CBLBQ13191 982 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 KLF1Q13351 362 aaPredicted RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 STAT4Q14765 748 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 KRT71Q3SY84 523 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 TFDP3Q5H9I0 405 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 FAM47CQ5HY64 1035 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 MARCH8Q5T0T0 291 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 PPP1R21Q6ZMI0 780 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 LRRC52Q8N7C0 313 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 PPP1R13LQ8WUF5 828 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 PIK3R5Q8WYR1 880 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 NKD2Q969F2 451 aaPredicted RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 ACAP3Q96P50 834 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 TBCBQ99426 244 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 SH2D3AQ9BRG2 576 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 GCOM2Q9BZD3 368 aaPredicted RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 NSRP1Q9H0G5 558 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 APOBEC3GQ9HC16 384 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 UBN1Q9NPG3 1134 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 TRMT13Q9NUP7 481 aaKnown RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 SMARCAL1Q9NZC9 954 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 BARX2Q9UMQ3 279 aaPredicted RBP9.13□□□□□ -0.95
MECP2-204ENST00000415944 NUB1Q9Y5A7 615 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 CEP290O15078 2479 aa9.13□□□□□ -0.95
MECP2-204ENST00000415944 SCN5AQ14524 2016 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 A0A1B0GUA9 196 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 SMIM35A0A1B0GVV1 85 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 ESYT3A0FGR9 886 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 TREHO43280 583 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 PQBP1O60828 265 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 KIAA0754O94854 1291 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 FAM107AO95990 144 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 ITGAVP06756 1048 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 FAM153BP0C7A2 387 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 STIP1P31948 543 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 SLC18A1P54219 525 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 HNRNPH2P55795 449 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 GNGT1P63211 74 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 ZNF200P98182 395 aaPredicted RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 ZNF844Q08AG5 666 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 PTK7Q13308 1070 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TFDP2Q14188 446 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TMEM132DQ14C87 1099 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 MORF4L2Q15014 288 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 SIX1Q15475 284 aaPredicted RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 PTGISQ16647 500 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TRIM71Q2Q1W2 868 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 FAM153CQ494X1 144 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 MTHFD1LQ6UB35 978 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TRMT1LQ7Z2T5 733 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 RPAINQ86UA6 219 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 SERINC5Q86VE9 423 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 CCDC50Q8IVM0 306 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 GSPT2Q8IYD1 628 aaKnown RBP9.12□□□□□ -0.95
MECP2-204ENST00000415944 ZSWIM2Q8NEG5 633 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TET1Q8NFU7 2136 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 BCAS4Q8TDM0 211 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TRAPPC12Q8WVT3 735 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 CPA5Q8WXQ8 436 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 KRT35Q92764 455 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 APBB2Q92870 758 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TLCD1Q96CP7 247 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 HAUS1Q96CS2 278 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 CFAP57Q96MR6 1250 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 MTMR12Q9C0I1 747 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 XYLT2Q9H1B5 865 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TRPV6Q9H1D0 765 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 CDT1Q9H211 546 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 ASIC3Q9UHC3 531 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 FAM153AQ9UHL3 310 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 TBX21Q9UL17 535 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 SHOC2Q9UQ13 582 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 ATP11BQ9Y2G3 1177 aa9.12□□□□□ -0.95
MECP2-204ENST00000415944 UMODL1Q5DID0 1318 aa9.11□□□□□ -0.95
MECP2-204ENST00000415944 TCRBV5S1A1TA0A578 114 aa9.11□□□□□ -0.95
MECP2-204ENST00000415944 NDUFAB1O14561 156 aa9.11□□□□□ -0.95
MECP2-204ENST00000415944 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
MECP2-204ENST00000415944 CDH16O75309 829 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms