RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TUSC2O75896 110 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZFXP17010 805 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 CHRM3P20309 590 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 VIPR2P41587 438 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 NFE2Q16621 373 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 PLEKHG6Q3KR16 790 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 ODR4Q5SWX8 454 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 LAYNQ6UX15 382 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 TMEM108Q6UXF1 575 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 ARHGEF25Q86VW2 580 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 FAM9BQ8IZU0 186 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 MORC4Q8TE76 937 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZNF384Q8TF68 577 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 KBTBD7Q8WVZ9 684 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 FKBP10Q96AY3 582 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 XPR1Q9UBH6 696 aa4.53□□□□□ -1.68
HMGB3P23-201ENST00000414981 LRRC3CA6NJW4 275 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 UNC5CO95185 931 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 TTLL1O95922 423 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 GRPP07492 148 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 FAM163BP0C2L3 166 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 NR2F6P10588 404 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 XRCC6P12956 609 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 GPD1P21695 349 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ITPKBP27987 946 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 PXNP49023 591 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF134P52741 427 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ARFIP2P53365 341 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 LOXL3P58215 753 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 TBCCQ15814 346 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 FAM153CQ494X1 144 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 MINDY4Q4G0A6 757 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ANO6Q4KMQ2 910 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 COLEC12Q5KU26 742 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 FAM102BQ5T8I3 360 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 TEDDM1Q5T9Z0 273 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 CCDC181Q5TID7 509 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 VPS53Q5VIR6 699 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF551Q7Z340 670 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 SMC5Q8IY18 1101 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 CHPFQ8IZ52 775 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ATRIPQ8WXE1 791 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 SARAFQ96BY9 339 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 LRGUKQ96M69 825 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ANLNQ9NQW6 1124 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 IL17RBQ9NRM6 502 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 CPA4Q9UI42 421 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 TMX2Q9Y320 296 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 RPS6KL1Q9Y6S9 549 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 BIVM-ERCC5R4GMW8 1640 aa4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 POLR2AP24928 1970 aaKnown RBP4.52□□□□□ -1.69
HMGB3P23-201ENST00000414981 ARAP1Q96P48 1450 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 RAPGEF2Q9Y4G8 1499 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 LINC00473A8K010 186 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 PPM1DO15297 605 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ANP32CO43423 234 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 TLR5O60602 858 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 URI1O94763 535 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 NXPH3O95157 252 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ONECUT2O95948 504 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 RHOP08100 348 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 MCCP23508 829 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 PPIFP30405 207 aaKnown RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 LRPAP1P30533 357 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ALDH9A1P49189 494 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 WNT3P56703 355 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 MRPS21P82921 87 aaKnown RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 FOXD4Q12950 439 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 E2F2Q14209 437 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ZNF618Q5T7W0 954 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 TSTD2Q5T7W7 516 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 NXNQ6DKJ4 435 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 PCSK9Q8NBP7 692 aaKnown RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 PPP1R35Q8TAP8 253 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 PMM1Q92871 262 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 VOPP1Q96AW1 172 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 RUNDC1Q96C34 613 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 KRTAP17-1Q9BYP8 105 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 DPH1Q9BZG8 443 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 TTYH3Q9C0H2 523 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 TMEM60Q9H2L4 133 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 METTL14Q9HCE5 456 aaKnown RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 CPNE5Q9HCH3 593 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ADARB2Q9NS39 739 aaKnown RBP4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 ASB6Q9NWX5 421 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 DKK3Q9UBP4 350 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 SHOC2Q9UQ13 582 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 SH2B3Q9UQQ2 575 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 SETD5Q9C0A6 1442 aa4.51□□□□□ -1.69
HMGB3P23-201ENST00000414981 CCDC194A0A1B0GVG4 234 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 A0A1W2PPL8 197 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 MYO1CO00159 1063 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 SLC16A3O15427 465 aaKnown RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 PHGDHO43175 533 aaKnown RBP4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 SLC11A2P49281 568 aa4.5□□□□□ -1.69
HMGB3P23-201ENST00000414981 UCP3P55916 312 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms