RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 O00370 1275 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CCDC130P13994 396 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 ANXA13P27216 316 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 MAGEA1P43355 309 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 KRT83P78385 493 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 FAM171A1Q5VUB5 890 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 OVOS1Q6IE37 1185 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 KCNT2Q6UVM3 1135 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 TAS1R1Q7RTX1 841 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 HERC6Q8IVU3 1022 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CMTR2Q8IYT2 770 aaKnown RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 WDTC1Q8N5D0 677 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 B3GALNT2Q8NCR0 500 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 WDR24Q96S15 920 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 TMEM209Q96SK2 561 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 ZBED2Q9BTP6 218 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 VN1R3Q9BXE9 311 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CRTAC1Q9NQ79 661 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 JRKLQ9Y4A0 524 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CYP1A1P04798 512 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 LINC00271P0C7V0 271 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 VDRP11473 427 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 SGO2Q562F6 1265 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 NAA35Q5VZE5 725 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 DENND1BQ6P3S1 775 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 OR10T2Q8NGX3 314 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 IRX2Q9BZI1 471 aaPredicted RBP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 VPS18Q9P253 973 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 TSPAN16Q9UKR8 245 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.45■□□□□ 0.22
SHMT2-202ENST00000414700 GBF1Q92538 1859 aa16.45■□□□□ 0.22
SHMT2-202ENST00000414700 ABCB4P21439 1286 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 LHX1P48742 406 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 VAV2P52735 878 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 NOMO3P69849 1222 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-202ENST00000414700 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 FAM109BQ6ICB4 259 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-202ENST00000414700 HDXQ7Z353 690 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 C1orf131Q8NDD1 294 aaKnown RBP16.44■□□□□ 0.22
SHMT2-202ENST00000414700 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 IGSF21Q96ID5 467 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 MYCBPQ99417 103 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-202ENST00000414700 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
SHMT2-202ENST00000414700 CYTH4Q9UIA0 394 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 TRANK1O15050 2925 aa16.44■□□□□ 0.22
SHMT2-202ENST00000414700 MYBPHLA2RUH7 354 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 TRAPPC3O43617 180 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 MICAL2O94851 1124 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 FTLP02792 175 aaPredicted RBP16.43■□□□□ 0.22
SHMT2-202ENST00000414700 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
SHMT2-202ENST00000414700 RABGGTBP53611 331 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 GALCP54803 685 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 RTP2Q5QGT7 225 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 TTC30AQ86WT1 665 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 NCAPGQ9BPX3 1015 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SYT15Q9BQS2 421 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 ISCUQ9H1K1 167 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SALL4Q9UJQ4 1053 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 GTF3C4Q9UKN8 822 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 PCDHGC3Q9UN70 934 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.225e-8■■■■■ 37.4
SHMT2-202ENST00000414700 GRXCR1A8MXD5 290 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 M0QYV0 167 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 CLDN5O00501 218 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 EFEMP2O95967 443 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 FAM163BP0C2L3 166 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 GZMAP12544 262 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 TYMPP19971 482 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SHHQ15465 462 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 CNGA2Q16280 664 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 MDH1BQ5I0G3 518 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 LLGL2Q6P1M3 1020 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 LRRTM3Q86VH5 581 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 METTL23Q86XA0 190 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 COLGALT1Q8NBJ5 622 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 TNIP3Q96KP6 325 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 SLC9A7Q96T83 725 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 THAP2Q9H0W7 228 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 INSL6Q9Y581 213 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
SHMT2-202ENST00000414700 ATMINO43313 823 aaPredicted RBP16.42■□□□□ 0.22
SHMT2-202ENST00000414700 MED7O43513 233 aa16.42■□□□□ 0.22
SHMT2-202ENST00000414700 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms