RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 VN1R3Q9BXE9 311 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 GPR62Q9BZJ7 368 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 UBE2TQ9NPD8 197 aaPredicted RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 NXF1Q9UBU9 619 aaKnown RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 NENFQ9UMX5 172 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 VWA8A3KMH1 1905 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 NLRC5Q86WI3 1866 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 C5orf67F2Z3F1 127 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 I3L4J1 428 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 CYP11A1P05108 521 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 CA3P07451 260 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 MYBL2P10244 700 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 ACO1P21399 889 aaKnown RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 RFX1P22670 979 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 TBXAS1P24557 533 aaPredicted RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 PAFAH1B1P43034 410 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 CUL2Q13617 745 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 MEI1Q5TIA1 1274 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 PPM1KQ8N3J5 372 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 FAM81BQ96LP2 452 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 STK33Q9BYT3 514 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 GPR88Q9GZN0 384 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 SDCBP2Q9H190 292 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 ACBD3Q9H3P7 528 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 FAM124BQ9H5Z6 455 aaPredicted RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 SMARCAL1Q9NZC9 954 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 SPG21Q9NZD8 308 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 EHD2Q9NZN4 543 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.57□□□□□ -0.72
DDB1-202ENST00000414411 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 DNAJC12Q9UKB3 198 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 CNTN6Q9UQ52 1028 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 PCDHB12Q9Y5F1 795 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
DDB1-202ENST00000414411 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 GRID2IPA4D2P6 1211 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 CYB561D2O14569 222 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 TRAPPC3O43617 180 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 HUS1O60921 280 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 FTCDO95954 541 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 P4HA1P13674 534 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 PPM1AP35813 382 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 MFAP3P55082 362 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 CDH8P55286 799 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 TNNC1P63316 161 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 PLCB3Q01970 1234 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 TAP1Q03518 808 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 CFAP221Q4G0U5 840 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SMYD5Q6GMV2 418 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 ENOSF1Q7L5Y1 443 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SPRED2Q7Z698 418 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 KBTBD7Q8WVZ9 684 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SHC3Q92529 594 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 PLVAPQ9BX97 442 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SMYD3Q9H7B4 428 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 MED4Q9NPJ6 270 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SF3B1O75533 1304 aaKnown RBP eCLIP10.56□□□□□ -0.72
DDB1-202ENST00000414411 FOXN3O00409 490 aaPredicted RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 GABRDO14764 452 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 FERP16591 822 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 FGFR3P22607 806 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 ERVK-21P61565 698 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 ELAVL2Q12926 359 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 RAB30Q15771 203 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 ALKBH5Q6P6C2 394 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 DSTYKQ6XUX3 929 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 TAS1R1Q7RTX1 841 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 DDX53Q86TM3 631 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 VPS36Q86VN1 386 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 GSPT2Q8IYD1 628 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 APPL2Q8NEU8 664 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 FAM71BQ8TC56 605 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 AENQ8WTP8 325 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 MRPL45Q9BRJ2 306 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 C17orf80Q9BSJ5 609 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 SELENOOQ9BVL4 669 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 RBM12Q9NTZ6 932 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
DDB1-202ENST00000414411 RWDD3Q9Y3V2 267 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms