RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CPA6Q8N4T0 437 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 METTL25Q8N6Q8 603 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 OR6P1Q8NGX9 317 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TBC1D16Q8TBP0 767 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SEPT1Q8WYJ6 367 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC29A1Q99808 456 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 KATNAL1Q9BW62 490 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TTYH3Q9C0H2 523 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 USP44Q9H0E7 712 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 DPEP3Q9H4B8 488 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 BRD9Q9H8M2 597 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GGT7Q9UJ14 662 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 MAP3K19Q56UN5 1328 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 COL15A1P39059 1388 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 NID2Q14112 1375 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CHD1O14646 1710 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 FER1L4A9Z1Z3 1794 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 MYH7BA7E2Y1 1941 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CCDC163A0A0D9SF12 145 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 AXIN1O15169 862 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 AP1G1O43747 822 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PEX1O43933 1283 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SNX3O60493 162 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SRGAP2O75044 1071 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 UNC5CO95185 931 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 IFNA14P01570 189 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 NUDT17P0C025 328 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 FAM153BP0C7A2 387 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 PCSK2P16519 638 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 NUDT1P36639 197 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 GNALP38405 381 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SLC9A3P48764 834 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 CEBPAP49715 358 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 ALDH18A1P54886 795 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 UAP1Q16222 522 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 WSCD2Q2TBF2 565 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TMEM95Q3KNT9 176 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 FAM153CQ494X1 144 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 INO80DQ53TQ3 878 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 VARS2Q5ST30 1063 aaKnown RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TTC13Q8NBP0 860 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 ADAMTS16Q8TE57 1224 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 BIRC8Q96P09 236 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 C17orf80Q9BSJ5 609 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 C1QTNF7Q9BXJ2 289 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 SENP6Q9GZR1 1112 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 MTFR1LQ9H019 292 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TP63Q9H3D4 680 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 UBA2Q9UBT2 640 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 FAM153AQ9UHL3 310 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TEKT2Q9UIF3 430 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 TINAGQ9UJW2 476 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 DMTF1Q9Y222 760 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 HEMK1Q9Y5R4 338 aaPredicted RBP5.47□□□□□ -1.53
HERC4-205ENST00000412272 UMODL1Q5DID0 1318 aa5.47□□□□□ -1.53
HERC4-205ENST00000412272 NWD1Q149M9 1564 aa5.46□□□□□ -1.53
HERC4-205ENST00000412272 PEAK1Q9H792 1746 aa5.46□□□□□ -1.53
HERC4-205ENST00000412272 MYH2Q9UKX2 1941 aa5.46□□□□□ -1.53
HERC4-205ENST00000412272 KDM3AQ9Y4C1 1321 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 APOL1O14791 398 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 BET1O15155 118 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TFAP2AP05549 437 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HOXA6P31267 233 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SHMT1P34896 483 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HSD17B3P37058 310 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ATP6V0D1P61421 351 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SELENBP1Q13228 472 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NR5A1Q13285 461 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CCINQ13939 588 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 KHDC1Q4VXA5 237 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 EPHA10Q5JZY3 1008 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 WDR59Q6PJI9 974 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TRAF7Q6Q0C0 670 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ACAD11Q709F0 780 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 DCP2Q8IU60 420 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 PM20D2Q8IYS1 436 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 FITM2Q8N6M3 262 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 KCT2Q8NC54 265 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 LHFPL5Q8TAF8 219 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SLC9A6Q92581 669 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HES6Q96HZ4 224 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 TCEANC2Q96MN5 208 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 ZPBPQ9BS86 351 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 OSBPL6Q9BZF3 934 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CUEDC2Q9H467 287 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 NARFLQ9H6Q4 476 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 SP110Q9HB58 689 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
HERC4-205ENST00000412272 TLR7Q9NYK1 1049 aaKnown RBP5.46□□□□□ -1.54
HERC4-205ENST00000412272 ATP6V1HQ9UI12 483 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 MAPRE3Q9UPY8 281 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 STXBP5LQ9Y2K9 1186 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 PRKAB1Q9Y478 270 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 PSME4Q14997 1843 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 PSMD11O00231 422 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 HEXBP07686 556 aa5.46□□□□□ -1.54
HERC4-205ENST00000412272 CDH5P33151 784 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms