RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SYN3O14994 580 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 ADAMTS3O15072 1205 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 RRP8O43159 456 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 AP5Z1O43299 807 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 PRAMEF12O95522 483 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 FGF19O95750 216 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 CPB1P15086 417 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 GABRR2P28476 465 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 WEE1P30291 646 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 MCM5P33992 734 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 GJA4P35212 333 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 EIF2S3P41091 472 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 SCTRP47872 440 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 QARSP47897 775 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 DGKGP49619 791 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 USP11P51784 963 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 CYP4A11Q02928 519 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 PTH1RQ03431 593 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 CLN3Q13286 438 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 NAIF1Q69YI7 327 aaPredicted RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 PCSK4Q6UW60 755 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 B3GNT9Q6UX72 402 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 SYNE3Q6ZMZ3 975 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 GAREM2Q75VX8 874 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 OTUD6AQ7L8S5 288 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 RABEPKQ7Z6M1 372 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 GOLGA6L1Q8N7Z2 621 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 FRMD1Q8N878 549 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 C3orf58Q8NDZ4 430 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 CD101Q93033 1021 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 TBC1D32Q96NH3 1257 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 PNMA5Q96PV4 448 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 POLR3CQ9BUI4 534 aaPredicted RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 ZMYND12Q9H0C1 365 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 SMG9Q9H0W8 520 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 TASP1Q9H6P5 420 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 C6orf50Q9HD87 102 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 RBM28Q9NW13 759 aaKnown RBP6.96□□□□□ -1.3
LINC00396-201ENST00000411690 YIPF1Q9Y548 306 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 PTPRBP23467 1997 aa6.96□□□□□ -1.3
LINC00396-201ENST00000411690 ESYT2A0FGR8 921 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 FAM149AA5PLN7 773 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 CBFA2T3O75081 653 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 GJB3O75712 270 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 ARSAP15289 507 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 GNA11P29992 359 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 BYSLQ13895 437 aaKnown RBP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 CAPSQ13938 189 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 CRY1Q16526 586 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 C2orf27AQ580R0 203 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 XKR9Q5GH70 373 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 GLRA4Q5JXX5 417 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 ZNF280DQ6N043 979 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 CC2D1AQ6P1N0 951 aaPredicted RBP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 CCDC33Q8N5R6 958 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 DEFB119Q8N690 84 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 USP33Q8TEY7 942 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 SETD7Q8WTS6 366 aaKnown RBP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 PPP1R10Q96QC0 940 aaKnown RBP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 NFKBIZQ9BYH8 718 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 GOLGA2P5Q9HBQ8 144 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 BCCIPQ9P287 314 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC00396-201ENST00000411690 RCAN3Q9UKA8 241 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 PCOLCE2Q9UKZ9 415 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 TBX20Q9UMR3 447 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 GDAQ9Y2T3 454 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 ASB3Q9Y575 518 aa6.95□□□□□ -1.3
LINC00396-201ENST00000411690 TNRC6BQ9UPQ9 1833 aaKnown RBP6.94□□□□□ -1.3
LINC00396-201ENST00000411690 NUP210Q8TEM1 1887 aaPredicted RBP6.94□□□□□ -1.3
LINC00396-201ENST00000411690 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 E9PAM4 449 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 N4BP3O15049 544 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 EDIL3O43854 480 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 SLC28A2O43868 658 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 MARCH6O60337 910 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 P4HBP07237 508 aaKnown RBP6.94□□□□□ -1.3
LINC00396-201ENST00000411690 HLA-EP13747 358 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 YWHABP31946 246 aaKnown RBP6.94□□□□□ -1.3
LINC00396-201ENST00000411690 CSRP3P50461 194 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 SEC13P55735 322 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 CYP4F8P98187 520 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
LINC00396-201ENST00000411690 ZNF33AQ06730 810 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 BFSP1Q12934 665 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 DUSP4Q13115 394 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 PDGFRLQ15198 375 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 TMEM132AQ24JP5 1023 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 MAP7D1Q3KQU3 841 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 PLEKHG6Q3KR16 790 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 Q4G0T1 1027 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 COLEC12Q5KU26 742 aa6.94□□□□□ -1.3
LINC00396-201ENST00000411690 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms