RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 TDGF1P13385 188 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 TNNI1P19237 187 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 ACAT1P24752 427 aaKnown RBP15.55■□□□□ 0.08
MCF2L-210ENST00000409954 HOXA6P31267 233 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 SOX9P48436 509 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 RUNX3Q13761 415 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 PUM1Q14671 1186 aaKnown RBP eCLIP15.55■□□□□ 0.08
MCF2L-210ENST00000409954 SNRNP35Q16560 246 aaKnown RBP15.55■□□□□ 0.08
MCF2L-210ENST00000409954 TXNDC8Q6A555 127 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 XXYLT1Q8NBI6 393 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 RDH13Q8NBN7 331 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 GLIS3Q8NEA6 775 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 OR5B17Q8NGF7 314 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 USP13Q92995 863 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-210ENST00000409954 HPS3Q969F9 1004 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 AGPAT3Q9NRZ7 376 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 EHD2Q9NZN4 543 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 RCOR1Q9UKL0 485 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 PCDHA7Q9UN72 937 aa15.55■□□□□ 0.08
MCF2L-210ENST00000409954 TACC1O75410 805 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 F13A1P00488 732 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 CST3P01034 146 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-210ENST00000409954 USP17L7P0C7H9 530 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 WARSP23381 471 aaKnown RBP15.54■□□□□ 0.08
MCF2L-210ENST00000409954 GNL1P36915 607 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-210ENST00000409954 ME1P48163 572 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 EHHADHQ08426 723 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 GAS6Q14393 721 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 PSMD6Q15008 389 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 PON2Q15165 354 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 PDGFRLQ15198 375 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 LMBRD2Q68DH5 695 aaPredicted RBP15.54■□□□□ 0.08
MCF2L-210ENST00000409954 SCARA3Q6AZY7 606 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 TXNDC11Q6PKC3 985 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 OSTM1Q86WC4 334 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 SCN4BQ8IWT1 228 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 TTC8Q8TAM2 541 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 SPATA17Q96L03 361 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 MMS19Q96T76 1030 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
MCF2L-210ENST00000409954 SCN1AP35498 2009 aa15.54■□□□□ 0.08
MCF2L-210ENST00000409954 PRR5-ARHGAP8B1AHC4 643 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 TRDMT1O14717 391 aaKnown RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 ATG13O75143 517 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 PFKLP17858 780 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 LMO2P25791 158 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 ATICP31939 592 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 PPP3CCP48454 512 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 GPR15P49685 360 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 PDE6CP51160 858 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 ARHGAP8P85298 464 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 FAM160A1Q05DH4 1040 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 TNK2Q07912 1038 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 GRSF1Q12849 480 aaKnown RBP eCLIP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 CCINQ13939 588 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 KNOP1Q1ED39 458 aaKnown RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 SDHAF4Q5VUM1 108 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 RESP18Q5W5W9 173 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 LONP2Q86WA8 852 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 C12orf56Q8IXR9 622 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 CEP57L1Q8IYX8 460 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 GOLGA5Q8TBA6 731 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 SCFD1Q8WVM8 642 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 SYT15Q9BQS2 421 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 SMG9Q9H0W8 520 aaKnown RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 SNX25Q9H3E2 840 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 RBM12Q9NTZ6 932 aaKnown RBP15.53■□□□□ 0.08
MCF2L-210ENST00000409954 GMEB2Q9UKD1 530 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 MYO15AQ9UKN7 3530 aa15.53■□□□□ 0.08
MCF2L-210ENST00000409954 TRAV19A0A0A6YYK7 116 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 CLIC2O15247 247 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 ATP2C2O75185 946 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 STAU1O95793 577 aaKnown RBP15.52■□□□□ 0.08
MCF2L-210ENST00000409954 PDGFRBP09619 1106 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 DLATP10515 647 aaKnown RBP15.52■□□□□ 0.08
MCF2L-210ENST00000409954 GRIK1P39086 918 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 AP3M2P53677 418 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 SATB1Q01826 763 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 NR1H3Q13133 447 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 PSMD2Q13200 908 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 TRPC3Q13507 836 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 BMT2Q1RMZ1 405 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 TMEM196Q5HYL7 178 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 LAIR1Q6GTX8 287 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 MYCBPAPQ8TBZ2 947 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 KBTBD7Q8WVZ9 684 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 CCDC127Q96BQ5 260 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 RMDN1Q96DB5 314 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 CGRRF1Q99675 332 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 CCL26Q9Y258 94 aa15.52■□□□□ 0.08
MCF2L-210ENST00000409954 MIA3Q5JRA6 1907 aa15.52■□□□□ 0.07
MCF2L-210ENST00000409954 COL4A3Q01955 1670 aa15.51■□□□□ 0.07
MCF2L-210ENST00000409954 PTPRJQ12913 1337 aa15.51■□□□□ 0.07
MCF2L-210ENST00000409954 RETP07949 1114 aa15.51■□□□□ 0.07
MCF2L-210ENST00000409954 SLFN14P0C7P3 912 aa15.51■□□□□ 0.07
MCF2L-210ENST00000409954 HDCP19113 662 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms