RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ZFP42Q96MM3 310 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 PCDHA11Q9Y5I1 949 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 SMIM28A0A1B0GU29 152 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 TBKBP1A7MCY6 615 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 CCDC188H7C350 402 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 BUB1BO60566 1050 aaPredicted RBP17.89■□□□□ 0.45
GCFC2-202ENST00000409857 ABCB4P21439 1286 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 KRT71Q3SY84 523 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 USP37Q86T82 979 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 GPATCH11Q8N954 259 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 RDH13Q8NBN7 331 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 OLIG1Q8TAK6 271 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 MDM1Q8TC05 714 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 HES6Q96HZ4 224 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 PPP1R10Q96QC0 940 aaKnown RBP17.89■□□□□ 0.45
GCFC2-202ENST00000409857 METTL14Q9HCE5 456 aaKnown RBP17.89■□□□□ 0.45
GCFC2-202ENST00000409857 SLC38A7Q9NVC3 462 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.45
GCFC2-202ENST00000409857 NLRC5Q86WI3 1866 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 TLL1O43897 1013 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 THP07101 528 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 GATMP50440 423 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 CLDN10P78369 228 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 BIRC3Q13489 604 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 ZBTB6Q15916 424 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 DCAF12L1Q5VU92 463 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 FAM117BQ6P1L5 589 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 TBC1D13Q9NVG8 400 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 MIOSQ9NXC5 875 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 CARNS1A5YM72 827 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 F8VZ95 297 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 USP8P40818 1118 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 SCNN1GP51170 649 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
GCFC2-202ENST00000409857 SLC35G2Q8TBE7 412 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 CXCL16Q9H2A7 254 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 SLITRK6Q9H5Y7 841 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 INPP5FQ9Y2H2 1132 aa17.88■□□□□ 0.45
GCFC2-202ENST00000409857 XPOTO43592 962 aaKnown RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 ATP2C2O75185 946 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 CYP3A5P20815 502 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 AFF1P51825 1210 aaKnown RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 SF3A3Q12874 501 aaKnown RBP eCLIP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 ZNF211Q13398 564 aaPredicted RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 PARD3BQ8TEW8 1205 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 ZMAT2Q96NC0 199 aaKnown RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 NCAPGQ9BPX3 1015 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 UTP11Q9Y3A2 253 aaKnown RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 KRT13P13646 458 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 DSC1Q08554 894 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 BFSP1Q12934 665 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 BTG3Q14201 252 aaPredicted RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 RAB30Q15771 203 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 JADE1Q6IE81 842 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 VPS36Q86VN1 386 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 CGRRF1Q99675 332 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 SLC40A1Q9NP59 571 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 AMFRQ9UKV5 643 aa17.87■□□□□ 0.45
GCFC2-202ENST00000409857 UBQLN1Q9UMX0 589 aaKnown RBP17.87■□□□□ 0.45
GCFC2-202ENST00000409857 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 POMCP01189 267 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 SHBGP04278 402 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 AP3M2P53677 418 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 WNT7BP56706 349 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 SMAD3P84022 425 aaKnown RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 MTMR3Q13615 1198 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 TMEM132DQ14C87 1099 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 AGBL2Q5U5Z8 902 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 FNBP1Q96RU3 617 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 KLC4Q9NSK0 619 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 COLQQ9Y215 455 aaPredicted RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 A0A0A6YYK5 440 aaPredicted RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 DDX3YO15523 660 aaKnown RBP17.86■□□□□ 0.45
GCFC2-202ENST00000409857 VAMP7P51809 220 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 TUSC3Q13454 348 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 AADACL2Q6P093 401 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 SLC30A5Q8TAD4 765 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 SEC14L1Q92503 715 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 ARHGEF26Q96DR7 871 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 CCDC114Q96M63 670 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 TMEM175Q9BSA9 504 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 CWH43Q9H720 699 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 TAS2R14Q9NYV8 317 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 GGA2Q9UJY4 613 aa17.86■□□□□ 0.45
GCFC2-202ENST00000409857 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 RASSF9O75901 435 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 NFICP08651 508 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 RNASELQ05823 741 aaKnown RBP17.85■□□□□ 0.45
GCFC2-202ENST00000409857 IFFO1Q0D2I5 559 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 SYCE1Q8N0S2 351 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 FIBCD1Q8N539 461 aa17.85■□□□□ 0.45
GCFC2-202ENST00000409857 PLEKHO2Q8TD55 490 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms