RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-204ENST00000409530 CEP290O15078 2479 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 CASQ1P31415 396 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 PDCLQ13371 301 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 TAS1R1Q7RTX1 841 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 ALS2CR12Q96Q35 445 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 SF3B1O75533 1304 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHANK2-204ENST00000409530 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 EFCAB14O75071 495 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 LSM8O95777 96 aaKnown RBP16.57■□□□□ 0.24
SHANK2-204ENST00000409530 CA8P35219 290 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 PDE4CQ08493 712 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 CNGA2Q16280 664 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 LCLAT1Q6UWP7 414 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF564Q8TBZ8 553 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-204ENST00000409530 MYLPFQ96A32 169 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 PCED1BQ96HM7 432 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 PGLYRP2Q96PD5 576 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
SHANK2-204ENST00000409530 NCANO14594 1321 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 ERBB2P04626 1255 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 PCSK1P29120 753 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 RTP2Q5QGT7 225 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
SHANK2-204ENST00000409530 PSRC1Q6PGN9 363 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-204ENST00000409530 PRSS55Q6UWB4 352 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-204ENST00000409530 DAAM2Q86T65 1068 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 FUKQ8N0W3 1084 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 TMLHEQ9NVH6 421 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 DSEQ9UL01 958 aa16.56■□□□□ 0.24
SHANK2-204ENST00000409530 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 E5RJQ4 531 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 GPD2P43304 727 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 SLC39A12Q504Y0 691 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 KCNT2Q6UVM3 1135 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 CRYBG2Q8N1P7 616 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 THEM5Q8N1Q8 247 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 DNAI2Q9GZS0 605 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MIS12Q9H081 205 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 ANAPC7Q9UJX3 599 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 BEST1O76090 585 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 ATP1A1P05023 1023 aaKnown RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 LCP1P13796 627 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 RPL17P18621 184 aaKnown RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MMP8P22894 467 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 DNAJB2P25686 324 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MAP3K7CLP57077 242 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 TSPY1Q01534 308 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 IFRD2Q12894 506 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MESDQ14696 234 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 CTXN3Q4LDR2 81 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 INTS6LQ5JSJ4 861 aaKnown RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 LIN9Q5TKA1 542 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 PMF1Q6P1K2 205 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 FAM35AQ86V20 835 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 CPNE8Q86YQ8 564 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 STKLD1Q8NE28 680 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 KIF18AQ8NI77 898 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF689Q96CS4 500 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MCEEQ96PE7 176 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 TMEM175Q9BSA9 504 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 RC3H2Q9HBD1 1191 aaKnown RBP16.55■□□□□ 0.24
SHANK2-204ENST00000409530 CDH9Q9ULB4 789 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 INTUQ9ULD6 942 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 KIAA1257Q9ULG3 409 aa16.55■□□□□ 0.24
SHANK2-204ENST00000409530 LCHNA4D1U4 455 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 BUB1BO60566 1050 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 GRAP2O75791 330 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 URI1O94763 535 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 GJB5O95377 273 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 CYP11A1P05108 521 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 CPB1P15086 417 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 BDNFP23560 247 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 BCAT1P54687 386 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 RNASE9P60153 205 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 PHF13Q86YI8 300 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 TRIM58Q8NG06 486 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 TPCN2Q8NHX9 752 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF558Q96NG5 402 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 ABI2Q9NYB9 513 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 CHD7Q9P2D1 2997 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 KIF2AO00139 706 aaPredicted RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 AP1G2O75843 785 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 ATP2A2P16615 1042 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 BST2Q10589 180 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 STILQ15468 1287 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms